CANDy: Automated analysis of domain architectures in carbohydrate-active enzymes. [PDF]
PLoS ONECarbohydrate-active enzymes (CAZymes) can be found in all domains of life and play a crucial role in metabolic and physiological processes. CAZymes often possess a modular structure, comprising not only catalytic domains but also associated domains such ...
Alex Windels +3 more
doaj +5 more sources
Homology to peptide pattern for annotation of carbohydrate-active enzymes and prediction of function [PDF]
BMC Bioinformatics, 2017 Background Carbohydrate-active enzymes are found in all organisms and participate in key biological processes. These enzymes are classified in 274 families in the CAZy database but the sequence diversity within each family makes it a major task to ...
P. K. Busk +4 more
doaj +4 more sources
Mapping the polysaccharide degradation potential of
BMC Genomics, 2012 Background The degradation of plant materials by enzymes is an industry of increasing importance. For sustainable production of second generation biofuels and other products of industrial biotechnology, efficient degradation of non-edible plant ...
Andersen Mikael R +3 more
doaj +15 more sources
Animals, 2020 As the co-enzyme of pyruvate formate-lyase under ruminal anaerobic condition, thiamine plays a critical role in carbohydrate metabolism in dairy cows.
Yiguang Zhao +8 more
doaj +3 more sources
Identifying carbohydrate-active enzymes of Cutaneotrichosporon oleaginosus using systems biology [PDF]
Microbial Cell Factories, 2021 Background The oleaginous yeast Cutaneotrichosporon oleaginosus represents one of the most promising microbial platforms for resource-efficient and scalable lipid production, with the capacity to accept a wide range of carbohydrates encapsulated in ...
Tobias Fuchs +10 more
doaj +2 more sources
Role of carbohydrate-active enzymes in brown planthopper virulence and adaptability [PDF]
Frontiers in Plant ScienceIntroductionHerbivorous insects, including the brown planthopper (BPH), Nilaparvata lugens, are among the most damaging pests to agricultural crops worldwide, particularly rice.
Fang Liu +9 more
doaj +2 more sources
Oral and Gut Microbial Carbohydrate-Active Enzymes Landscape in Health and Disease [PDF]
Frontiers in Microbiology, 2021 Inter-individual variability in the microbial gene complement encoding for carbohydrate-active enzymes (CAZymes) can profoundly regulate how the host interacts with diverse carbohydrate sources thereby influencing host health. CAZy-typing, characterizing
Stanley O. Onyango +3 more
doaj +2 more sources
Apiospora arundinis, a panoply of carbohydrate-active enzymes and secondary metabolites [PDF]
IMA FungusThe Apiospora genus comprises filamentous fungi with promising potential, though its full capabilities remain undiscovered. In this study, we present the first genome assembly of an Apiospora arundinis isolate, demonstrating a highly complete and ...
Trine Sørensen +11 more
doaj +2 more sources
Regulating Strategies for Producing Carbohydrate Active Enzymes by Filamentous Fungal Cell Factories [PDF]
Frontiers in Bioengineering and Biotechnology, 2020 Filamentous fungi are important eukaryotic organisms crucial in substrate degradation and carbon cycle on the earth and have been harnessed as cell factories for the production of proteins and other high value-added products in recent decades.
Teng Zhang +5 more
doaj +2 more sources
Carbohydrate-active enzymes from pigmented
BMC Microbiology, 2011 Background Spore-forming Bacilli are Gram-positive bacteria commonly found in a variety of natural habitats, including soil, water and the gastro-intestinal (GI)-tract of animals. Isolates of various Bacillus species produce pigments, mostly carotenoids,
Henrissat Bernard +5 more
doaj +3 more sources