Results 11 to 20 of about 5,020 (218)
cazy_webscraper: local compilation and interrogation of comprehensive CAZyme datasets [PDF]
Microbial Genomics, 2022 Carbohydrate active enzymes (CAZymes) are pivotal in biological processes including energy metabolism, cell structure maintenance, signalling, and pathogen recognition. Bioinformatic prediction and mining of CAZymes improves our understanding of these activities and enables discovery of candidates of interest for industrial ...
Emma E. M. Hobbs +2 more
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Comprehensive evaluation of CAZyme prediction tools in fungal and bacterial species [PDF]
, 2021 Non peer ...
Hobbs, Emma +3 more
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BMC MicrobiologyBackground The global over-reliance on non-renewable fossil fuels has led to the emission of greenhouse gases, creating a critical global environmental challenge. There is an urgent need for alternative solutions like biofuels.
Amsale Melkamu Sime +3 more
doaj +2 more sources
Adaptations of Alteromonas sp. 76-1 to Polysaccharide Degradation: A CAZyme Plasmid for Ulvan Degradation and Two Alginolytic Systems [PDF]
Frontiers in Microbiology, 2019 Studying the physiology and genomics of cultured hydrolytic bacteria is a valuable approach to decipher the biogeochemical cycling of marine polysaccharides, major nutrients derived from phytoplankton and macroalgae.
Hanna Koch +4 more
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Expression-based clustering of CAZyme-encoding genes of Aspergillus niger [PDF]
BMC Genomics, 2017 Background The Aspergillus niger genome contains a large repertoire of genes encoding carbohydrate active enzymes (CAZymes) that are targeted to plant polysaccharide degradation enabling A. niger to grow on a wide range of plant biomass substrates. Which
Birgit S. Gruben +5 more
doaj +5 more sources
High activity CAZyme cassette for improving biomass degradation in thermophiles [PDF]
Biotechnology for Biofuels, 2018 Background Thermophilic microorganisms and their enzymes offer several advantages for industrial application over their mesophilic counterparts. For example, a hyperthermophilic anaerobe, Caldicellulosiruptor bescii, was recently isolated from hot ...
Roman Brunecky +13 more
doaj +3 more sources
Gut microbial CAZymes markers for depression
Translational Psychiatry, 2023 Abstract Major depressive disorder (MDD) is a serious mental illness, characterized by disturbances of gut microbiome, it is required to further explore how the carbohydrate-active enzymes (CAZymes) were changed in MDD. Here, using the metagenomic data from patients with MDD ( n
Peijun Xie +16 more
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Foods, 2022 Laminaria digitata is a novel feedstuff that can be used in pig diets to replace conventional feedstuffs. However, its resilient cell wall can prevent the monogastric digestive system from accessing intracellular nutrients.
David Miguel Ribeiro +15 more
doaj +1 more source
iScience, 2023 Summary: Soil biota has a crucial impact on soil ecology, global climate changes, and effective crop management and studying the diverse ecological roles of dipteran larvae deepens the understanding of soil food webs.
Vitor Trinca +12 more
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iCAZyGFADB: an insect CAZyme and gene function annotation database
Database, 2023 Abstract With the continuous upgrading of high-throughput sequencing technology, a large amount of biological genome data has been deciphered and published. The research on functional genes of biological genomes urgently needs a collection of service websites with user-friendly and full annotation functions for a variety of gene function
Chun Fu, Yaojun Yang
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