Results 21 to 30 of about 4,643 (177)

iCAZyGFADB: an insect CAZyme and gene function annotation database

Database, 2023
Abstract With the continuous upgrading of high-throughput sequencing technology, a large amount of biological genome data has been deciphered and published. The research on functional genes of biological genomes urgently needs a collection of service websites with user-friendly and full annotation functions for a variety of gene function
Chun Fu, Yaojun Yang
openaire   +3 more sources

N-glycan breakdown by bacterial CAZymes

Essays in Biochemistry, 2023
Abstract The modification of proteins by N-glycans is ubiquitous to most organisms and they have multiple biological functions, including protecting the adjoining protein from degradation and facilitating communication or adhesion between cells, for example. Microbes have evolved CAZymes to deconstruct different types of N-glycans and
openaire   +2 more sources

Complete Genome Sequence and Comparative Genome Analysis of Variovorax sp. Strains PAMC28711, PAMC26660, and PAMC28562 and Trehalose Metabolic Pathways in Antarctica Isolates

International Journal of Microbiology, 2022
The complete genomes of Variovorax strains were analyzed and compared along with the genomes of Variovorax strains PAMC28711, PAMC28562, and PAMC26660, Antarctic isolates.
Prasansah Shrestha, Jayram Karmacharya, So-Ra Han, Jun Hyuck Lee, Hyun Park, Tae-Jin Oh   +5 more
doaj   +1 more source

Comparative Genomics Uncovers the Genetic Diversity and Synthetic Biology of Secondary Metabolite Production of Trametes

Mycobiology, 2020
The carbohydrate-active enzyme (CAZyme) genes of Trametes contribute to polysaccharide degradation. However, the comprehensive analysis of the composition of CAZymes and the biosynthetic gene clusters (BGCs) of Trametes remain unclear. Here, we conducted
Yan Zhang, Jingjing Wang, Chen Yajun, Minghui Zhou, Wei Wang, Ming Geng, Decong Xu, Zhongdong Xu   +7 more
doaj   +1 more source

Genome-wide identification reveals conserved carbohydrate-active enzyme repertoire in termites

Frontiers in Forests and Global Change, 2023
Termites play an important role as decomposers of organic matter in forests by utilizing their gut symbionts and associated carbohydrate-active enzymes (CAZymes) to digest wood materials. However, there is a limited understanding of the entire repertoire
Shulin He, Amrita Chakraborty, Fei Li, Cao Zhou, Binchuan Zhang, Bin Chen, Bin Jiang   +6 more
doaj   +1 more source

Integrated Omics analysis of pig muscle metabolism under the effects of dietary Chlorella vulgaris and exogenous enzymes

Scientific Reports, 2022
Monogastric feeding is dependent on costly conventional feedstuffs. Microalgae such as Chlorella vulgaris are a sustainable alternative; however, its recalcitrant cell wall hinders monogastric digestion.
Diogo Coelho, David Ribeiro, Hugo Osório, André Martinho de Almeida, José António Mestre Prates   +4 more
doaj   +1 more source

De novo transcriptome assembly of the bamboo snout beetle Cyrtotrachelus buqueti reveals ability to degrade lignocellulose of bamboo feedstock

Biotechnology for Biofuels, 2018
Background The bamboo weevil Cyrtotrachelus buqueti, which is considered a pest species, damages bamboo shoots via its piercing–sucking mode of feeding. C.
Chaobing Luo, Yuanqiu Li, Hong Liao, Yaojun Yang   +3 more
doaj   +1 more source

Metatranscriptome Profiling of a Specialized Microbial Consortium during the Degradation of Nixtamalized Maize Pericarp

Microbiology Spectrum, 2022
Lignocellulose degradation by microbial consortia is multifactorial; hence, it must be analyzed from a holistic perspective. In this study, the temporal transcriptional activity of consortium PM-06, a nixtamalized maize pericarp (NMP) degrader, was ...
José Germán Serrano-Gamboa, Carlos Abraham Fócil-Espinosa, Pedro J. Cabello-Yeves, Felipe H. Coutinho, Rafael Antonio Rojas-Herrera, Mónica Noel Sánchez-González   +5 more
doaj   +1 more source

Plasma Metabolites and Liver Composition of Broilers in Response to Dietary Ulva lactuca with Ulvan Lyase or a Commercial Enzyme Mixture

Molecules, 2022
The effect of a high incorporation level of Ulva lactuca, individually and supplemented with a Carbohydrate-Active enZyme (CAZyme) on broilers’ plasma parameters and liver composition is assessed here.
Cristina M. Alfaia, Mónica M. Costa, Rui M. A. Pinto, José M. Pestana, Miguel Mourato, Patrícia Carvalho, Cátia F. Martins, Paula A. Lopes, Madalena M. Lordelo, José A. M. Prates   +9 more
doaj   +1 more source

Global Profiling of Carbohydrate Active Enzymes in Human Gut Microbiome.

PLoS ONE, 2015
MotivationCarbohydrate Active enzyme (CAZyme) families, encoded by human gut microflora, play a crucial role in breakdown of complex dietary carbohydrates into components that can be absorbed by our intestinal epithelium.
Tanudeep Bhattacharya, Tarini Shankar Ghosh, Sharmila S Mande   +2 more
doaj   +1 more source