Results 21 to 30 of about 6,460 (220)
CAZymes from the thermophilic fungus Thermoascus aurantiacus are induced by C5 and C6 sugars
Biotechnology for Biofuels, 2021 Background Filamentous fungi are excellent lignocellulose degraders, which they achieve through producing carbohydrate active enzymes (CAZymes). CAZyme production is highly orchestrated and gene expression analysis has greatly expanded understanding of ...
Raphael Gabriel +7 more
doaj +1 more source
N-glycan breakdown by bacterial CAZymes
Essays in Biochemistry, 2023 Abstract The modification of proteins by N-glycans is ubiquitous to most organisms and they have multiple biological functions, including protecting the adjoining protein from degradation and facilitating communication or adhesion between cells, for example. Microbes have evolved CAZymes to deconstruct different types of N-glycans and
openaire +2 more sources
International Journal of Microbiology, 2022 The complete genomes of Variovorax strains were analyzed and compared along with the genomes of Variovorax strains PAMC28711, PAMC28562, and PAMC26660, Antarctic isolates.
Prasansah Shrestha +5 more
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iCAZyGFADB: an insect CAZyme and gene function annotation database
Database, 2023 Abstract With the continuous upgrading of high-throughput sequencing technology, a large amount of biological genome data has been deciphered and published. The research on functional genes of biological genomes urgently needs a collection of service websites with user-friendly and full annotation functions for a variety of gene function
Chun Fu, YaoJun Yang
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Mycobiology, 2020 The carbohydrate-active enzyme (CAZyme) genes of Trametes contribute to polysaccharide degradation. However, the comprehensive analysis of the composition of CAZymes and the biosynthetic gene clusters (BGCs) of Trametes remain unclear. Here, we conducted
Yan Zhang +7 more
doaj +1 more source
dbCAN-seq update: CAZyme gene clusters and substrates in microbiomes
Nucleic Acids Research, 2022 Abstract Carbohydrate Active EnZymes (CAZymes) are significantly important for microbial communities to thrive in carbohydrate rich environments such as animal guts, agricultural soils, forest floors, and ocean sediments. Since 2017, microbiome sequencing and assembly have produced numerous metagenome assembled genomes (MAGs).
Jinfang Zheng +8 more
openaire +2 more sources
Polysaccharide utilization loci and nutritional specialization in a dominant group of butyrate-producing human colonic Firmicutes [PDF]
, 2015 Acknowledgements The Rowett Institute of Nutrition and Health (University of Aberdeen) receives financial support from the Scottish Government Rural and Environmental Sciences and Analytical Services (RESAS).
Bernalier-Donadille, Annick +9 more
core +3 more sources
Scientific Reports, 2022 Monogastric feeding is dependent on costly conventional feedstuffs. Microalgae such as Chlorella vulgaris are a sustainable alternative; however, its recalcitrant cell wall hinders monogastric digestion.
Diogo Coelho +4 more
doaj +1 more source
Genome-wide identification reveals conserved carbohydrate-active enzyme repertoire in termites
Frontiers in Forests and Global Change, 2023 Termites play an important role as decomposers of organic matter in forests by utilizing their gut symbionts and associated carbohydrate-active enzymes (CAZymes) to digest wood materials. However, there is a limited understanding of the entire repertoire
Shulin He +6 more
doaj +1 more source
Fungal ecological strategies reflected in gene transcription - a case study of two litter decomposers. [PDF]
, 2019 Microbial communities interplay with their environment through their functional traits that can be a response or an effect on the environment. Here, we explore how a functional trait-the decomposition of organic matter, can be addressed based on genetic ...
Barbi, Florian +14 more
core +3 more sources