Results 71 to 80 of about 6,460 (220)

dbCAN-seq: a database of carbohydrate-active enzyme (CAZyme) sequence and annotation [PDF]

Nucleic Acids Research, 2017
Carbohydrate-active enzyme (CAZymes) are not only the most important enzymes for bioenergy and agricultural industries, but also very important for human health, in that human gut microbiota encode hundreds of CAZyme genes in their genomes for degrading various dietary and host carbohydrates.
Huang, Le, Zhang, Han, Wu, Peizhi, Entwistle, Sarah, Li, Xueqiong, Yohe, Tanner, Yi, Haidong, Yang, Zhenglu, Yin, Yanbin   +8 more
openaire   +2 more sources

Biocatalytic potential of basidiomycetes: Relevance, challenges and research interventions in industrial processes

Scientific African, 2021
Basidiomycetes are potential cell factories by their possession of genes that express a wide range of plant cell wall-degrading enzymes categorized in the Carbohydrate-active Enzymes (CAZyme) database.
Joseph A. Bentil
doaj   +1 more source

Metagenomic analysis of microbial consortia enriched from compost: new insights into the role of Actinobacteria in lignocellulose decomposition [PDF]

, 2016
Additional file 11: Table S7. Summary of de novo assembly results (37 k)
Cheng Wang, Da Dong, Hailong Wang, Haoshu Wang, Karin Müller, Weixiang Wu, Yong Qin   +6 more
core   +8 more sources

Advancements in Mass Spectrometry‐Based Glycomics in Food and Nutritional Science

Mass Spectrometry Reviews, EarlyView.
ABSTRACT This review highlights advancements in mass spectrometry (MS)‐based glycomics in food and nutritional science. Carbohydrates, which are vital for human health, exhibit complex structures, making their analysis challenging. MS has become an indispensable tool for elucidating the structures of carbohydrates, including glycans, through soft ...
JaeHui Song, HyunJi Lee, Youngshik Choe, Hyeyoung Lee   +3 more
wiley   +1 more source

Profiling the dynamic adaptations of CAZyme-Producing microorganisms in the gastrointestinal tract of South African goats

Heliyon
The gastrointestinal tract of goats serves as a habitat for anaerobic microbial populations that work together to break down complex plant material, including lignocellulose.
Kgodiso J. Rabapane, Tonderayi S. Matambo   +1 more
doaj   +1 more source

Complete Genome Analysis of Subtercola sp. PAMC28395: Genomic Insights into Its Potential Role for Cold Adaptation and Biotechnological Applications

Microorganisms, 2023
This study reports the complete genome sequence of Subtercola sp. PAMC28395, a strain isolated from cryoconite in Uganda. This strain possesses several active carbohydrate-active enzyme (CAZyme) genes involved in glycogen and trehalose metabolism ...
Ryoichi Yamada, So-Ra Han, Hyun Park, Tae-Jin Oh   +3 more
doaj   +1 more source

Gut bacteria responding to dietary change encode sialidases that exhibit preference for red meat-associated carbohydrates. [PDF]

, 2019
Dietary habits have been associated with alterations of the human gut resident microorganisms contributing to obesity, diabetes and cancer1. In Western diets, red meat is a frequently eaten food2, but long-term consumption has been associated with ...
Alisson-Silva, Frederico, Chang, Geoffrey, Chuzel, Léa, Diaz, Sandra L, Ganatra, Mehul B, Huang, Jianbo, Martino, Cameron, Rees, Steven D, Secrest, Patrick, Siegel, Dionicio, Taron, Christopher H, Varki, Ajit, Zaramela, Livia S, Zengler, Karsten, Zuñiga, Cristal   +14 more
core  

First genome sequence of a European Alternaria brassicae isolate and genes involved in early development of alternaria leaf spot on Brassica juncea

Pest Management Science, EarlyView.
This article reports the first genome sequence of a UK Alternaria brassicae isolate. Dual RNA‐sequencing profiling of A. brassicae‐infected Brassica juncea leaves identified differentially expressed genes involved in pathogenicity and host response pathways in moderately resistant Sej‐2 (2) and moderately susceptible Pusa Jaikisan cultivars.
Kevin M. King, Graham McLaughlin, Chinthani S. Karandeni Dewage, Zedi Gao, David J. Hughes, Jonathan S. West, Henrik U. Stotz   +6 more
wiley   +1 more source

Adaptations of Alteromonas sp. 76-1 to Polysaccharide Degradation: A CAZyme Plasmid for Ulvan Degradation and Two Alginolytic Systems

Frontiers in Microbiology, 2019
Studying the physiology and genomics of cultured hydrolytic bacteria is a valuable approach to decipher the biogeochemical cycling of marine polysaccharides, major nutrients derived from phytoplankton and macroalgae.
Hanna Koch, Heike M. Freese, Richard L. Hahnke, Meinhard Simon, Matthias Wietz   +4 more
doaj   +1 more source

Succession of physiological stages hallmarks the transcriptomic response of the fungus Aspergillus niger to lignocellulose

Biotechnology for Biofuels, 2020
Background Understanding how fungi degrade lignocellulose is a cornerstone of improving renewables-based biotechnology, in particular for the production of hydrolytic enzymes. Considerable progress has been made in investigating fungal degradation during
Jolanda M. van Munster, Paul Daly, Martin J. Blythe, Roger Ibbett, Matt Kokolski, Sanyasi Gaddipati, Erika Lindquist, Vasanth R. Singan, Kerrie W. Barry, Anna Lipzen, Chew Yee Ngan, Christopher J. Petzold, Leanne Jade G. Chan, Mikko Arvas, Roxane Raulo, Steven T. Pullan, Stéphane Delmas, Igor V. Grigoriev, Gregory A. Tucker, Blake A. Simmons, David B. Archer   +20 more
doaj   +1 more source