Results 61 to 70 of about 10,832 (224)

Carbohydrate-active enzymes in Trichoderma harzianum: a bioinformatic analysis bioprospecting for key enzymes for the biofuels industry

BMC Genomics, 2017
Background Trichoderma harzianum is used in biotechnology applications due to its ability to produce powerful enzymes for the conversion of lignocellulosic substrates into soluble sugars.
Jaire Alves Ferreira Filho, Maria Augusta Crivelente Horta, Lilian Luzia Beloti, Clelton Aparecido dos Santos, Anete Pereira de Souza   +4 more
doaj   +1 more source

Impact of dietary Chlorella vulgaris and carbohydrate-active enzymes incorporation on plasma metabolites and liver lipid composition of broilers

BMC Veterinary Research, 2021
Background Chlorella vulgaris has been proposed as a sustainable green feedstock in poultry nutrition due to its ease of cultivation, minimal environmental impact and balanced nutritional composition. However, the majority of studies documents the use of
Diogo Francisco Maurício Coelho, Cristina Maria Riscado Pereira Mateus Alfaia, José Miguel Pestana Assunção, Mónica Costa, Rui Manuel Amaro Pinto, Carlos Mendes Godinho de Andrade Fontes, Madalena M. Lordelo, José António Mestre Prates   +7 more
doaj   +1 more source

Functional annotation of rhizospheric phageome of the wild plant species Moringa oleifera

Frontiers in Microbiology, 2023
IntroductionThe study aims to describe phageome of soil rhizosphere of M.oleifera in terms of the genes encoding CAZymes and other KEGG enzymes.MethodsGenes of the rhizospheric virome of the wild plant species Moringa oleifera were investigated for their
Ruba A. Ashy, Rewaa S. Jalal, Hana S. Sonbol, Mashael D. Alqahtani, Fatmah O. Sefrji, Sahar A. Alshareef, Fatimah M. Alshehrei, Haneen W. Abuauf, Lina Baz, Manal A. Tashkandi, Israa J. Hakeem, Mohammed Y. Refai, Aala A. Abulfaraj   +12 more
doaj   +1 more source

Multi-omic Analyses of Extensively Decayed Pinus contorta Reveal Expression of a Diverse Array of Lignocellulose-Degrading Enzymes. [PDF]

, 2018
Fungi play a key role cycling nutrients in forest ecosystems, but the mechanisms remain uncertain. To clarify the enzymatic processes involved in wood decomposition, the metatranscriptomics and metaproteomics of extensively decayed lodgepole pine were ...
Barry, Kerrie, Bhatnagar, Jennifer M, Cullen, Dan, Fauchery, Laure, Gaskell, Jill, Grigoriev, Igor V, Hori, Chiaki, Kohler, Annegret, Lail, Kathleen, Martin, Francis, Peng, Yi, Sabat, Grzegorz, Stewart, Philip E, Zeiner, Carolyn A   +13 more
core  

De novo genome assembly and annotation of rice sheath rot fungus Sarocladium oryzae reveals genes involved in Helvolic acid and Cerulenin biosynthesis pathways [PDF]

, 2016
Morphology of Saro-13 isolate used for whole genome sequencing.
Channappa Mahadevaiah, H. B. Mahesh, Mothukapalli Krishnareddy Prasannakumar, Shailaja Hittalmani   +3 more
core   +9 more sources

Seasonal drivers of plant–soil–microbial community structure and functions in Western Himalayan grasslands, Pakistan

Grassland Research, EarlyView.
Plant species richness was greater in summer in both alpine and subalpine grassland ecosystems. Soil moisture demonstrates significant positive correlations with soil organic carbon and total nitrogen across seasonal periods. Microbial α‐diversity peaks during summer but maintains functional stability across seasons.
Huma Ali, Muhammad Rafiq, Allan Degen, Ben Sparrow, Zhanhuan Shang   +4 more
wiley   +1 more source

Specialized Bacteroidetes dominate the Arctic Ocean during marine spring blooms

Frontiers in Microbiology
A metagenomic time series from Arctic seawater was obtained from Dease Strait, to analyse the changes in bacterioplankton caused by the summer phytoplankton bloom.
Álvaro Redondo-Río, Christopher J. Mundy, Javier Tamames, Carlos Pedrós-Alió   +3 more
doaj   +1 more source

CAZymes-based ranking of fungi (CBRF): an interactive web database for identifying fungi with extrinsic plant biomass degrading abilities

Bioresources and Bioprocessing, 2019
Carbohydrate-active enzymes (CAZymes) are industrially important enzymes, which are involved in synthesis and breakdown of carbohydrates. CAZymes secreted by microorganisms especially fungi are widely used in industries.
Ayyappa Kumar Sista Kameshwar, Luiz Pereira Ramos, Wensheng Qin   +2 more
doaj   +1 more source

Characterisation of pathogen-specific regions and novel effector candidates in Fusarium oxysporum f. sp. cepae [PDF]

, 2018
A reference-quality assembly of Fusarium oxysporum f. sp. cepae (Foc), the causative agent of onion basal rot has been generated along with genomes of additional pathogenic and non-pathogenic isolates of onion.
A Bankevich, A Gurevich, A Krogh, A Taylor, A Taylor, AC Testa, AH Williams, AL Delcher, AR Quinlan, B Gel, B Langmead, B Ramos, BJ Haas, BJ Walker, BV Chellapan, C Camacho, C Cramer, C Trapnell, CB Michielse, D Brayford, D Medini, F Gawehns, FA Simão, GH Teetor-Barsch, H Bayraktar, HC Does van der, I Vlaardingerbroek, J Mistry, J Niño-Sánchez, J Sperschneider, K Katoh, K Sasaki, K Tamura, KJ Hoff, L Epstein, L Faino, L Li, L Ma, L-J Ma, M Stanke, MJ Southwood, MJ Southwood, NH Barton, P Dam van, P Jones, PJ Kersey, PM Houterman, PM Houterman, R Apweiler, R Lanfear, RP Baayen, RP Brown, S Aimé, S Dong, S-Y Jiang, SM Schmidt, SM Schmidt, T Weber, TN Petersen, V Lombard, VGAA Vleeshouwers   +60 more
core   +3 more sources

Beyond “you are what you eat”: Unlocking gut microbiota‐mediated biotransformation of dietary phytochemicals

iMetaOmics, EarlyView.
The “efficacy paradox” of phytochemicals, low bioavailability yet significant health benefits, is associated with gut microbiota, which biotransforms dietary precursors into bioactive metabolites, enabling systemic effects. Thus, health outcomes of diet depend not just on intake “the rainbow”, but on gut microbial metabolism, redefining “you are what ...
Peng Yang, Ren‐You Gan
wiley   +1 more source