Results 71 to 80 of about 12,625 (251)

Transcriptome and proteome analysis reveals the characteristics of carbon metabolism in the mycelial development of Gomphus purpuraceus

Food Science and Human Wellness
Gomphus purpuraceus is an ancient wild edible mushroom. However, the niche and lignocellulose degradation system of G. purpuraceus have remained cryptic. In the current study, transcriptome and proteome sequencing of G.
Yangyang Geng, Shixin Zhang, Yana Liu, Likang Qin   +3 more
doaj   +1 more source

Genome analysis and CAZy repertoire of a novel fungus Aspergillus sydowii C6d with lignocellulolytic ability isolated from camel rumen

Electronic Journal of Biotechnology, 2022
Background: Camels are known for their survival under harsh and nutrient-deficient climates. Camel rumen ecosystem presents a unique opportunity to study the ruminal microbes helping the camel in this task.
Nilam J. Tulsani, Subhash J. Jakhesara, Ankit T. Hinsu, Basanti Jyotsana, Nishant A. Dafale, Niteen V. Patil, Hemant J. Purohit, Chaitanya G. Joshi   +7 more
doaj   +1 more source

Ruminal microbiota, carbohydrate-active enzymes and milk bioactive compounds in Italian Mediterranean dairy buffaloes fed total mixed ration with or without green forage

Italian Journal of Animal Science
The aim of the present study was to determine the effect of including green forage in the diet of Italian Mediterranean dairy buffaloes on the ruminal microbiota, CAZymes profile, functional biomolecules and total antioxidant activity in bulk milk ...
Angela Salzano, Anella Saggese, Elisa Martino, Gianluca Neglia, Martina Cascone, Matteo Selci, Loredana Baccigalupi, Nunzia D’Onofrio, Donato Giovannelli, Giovanna Bifulco, Ezio Ricca, Maria Luisa Balestrieri, Michael D’Occhio, Giuseppe Campanile   +13 more
doaj   +1 more source

Genome-wide identification reveals conserved carbohydrate-active enzyme repertoire in termites

Frontiers in Forests and Global Change, 2023
Termites play an important role as decomposers of organic matter in forests by utilizing their gut symbionts and associated carbohydrate-active enzymes (CAZymes) to digest wood materials. However, there is a limited understanding of the entire repertoire
Shulin He, Amrita Chakraborty, Fei Li, Cao Zhou, Binchuan Zhang, Bin Chen, Bin Jiang   +6 more
doaj   +1 more source

Genome sequencing and CAZymes repertoire analysis of Diaporthe eres P3-1W causing postharvest fruit rot of ‘Hongyang’ kiwifruit in China

PeerJ
Postharvest rot caused by various fungal pathogens is a damaging disease affecting kiwifruit production and quality, resulting in significant annual economic losses.
Lizhen Ling, Ling-Ling Chen, Zhen-Zhen Liu, Lan Luo, Si-Han Tai, Shu-Dong Zhang   +5 more
semanticscholar   +1 more source

Discovery of novel secretome CAZymes from Penicillium sclerotigenum by bioinformatics and explorative proteomics analyses during sweet potato pectin digestion

Frontiers in Bioengineering and Biotechnology, 2022
Novel selective enzymatic refining of sweet potato processing residues requires judicious enzyme selection and enzyme discovery. We prepared a pectinaceous cell wall polysaccharide fraction from sweet potato using an enzymatic a treatment to preserve the
Kristian Barrett, Hai Zhao, Pengfei Hao, A. Bacic, L. Lange, J. Holck, A. Meyer   +6 more
semanticscholar   +1 more source

De novo genome assembly and annotation of rice sheath rot fungus Sarocladium oryzae reveals genes involved in Helvolic acid and Cerulenin biosynthesis pathways [PDF]

, 2016
Morphology of Saro-13 isolate used for whole genome sequencing.
Channappa Mahadevaiah, H. B. Mahesh, Mothukapalli Krishnareddy Prasannakumar, Shailaja Hittalmani   +3 more
core   +9 more sources

Artificial Intelligence Powers Protein Functional Annotation

Advanced Science, EarlyView.
This review systematically summarizes how artificial intelligence advances protein functional annotation. It organizes existing methods into six unified modeling paradigms and analyzes their applications in Gene Ontology and Enzyme Commission prediction.
Wenkang Wang, Qiurong Yang, Min Zeng, Ruiqing Zheng, Min Li   +4 more
wiley   +1 more source

Comparative genomics between Trichomonas tenax and Trichomonas vaginalis: CAZymes and candidate virulence factors

Frontiers in Microbiology
Introduction The oral trichomonad Trichomonas tenax is increasingly appreciated as a likely contributor to periodontitis, a chronic inflammatory disease induced by dysbiotic microbiota, in humans and domestic animals and is strongly associated with its ...
Lenshina A. Mpeyako, Adam J. Hart, Nicholas P. Bailey, J. Carlton, B. Henrissat, Steven A. Sullivan, R. Hirt   +6 more
semanticscholar   +1 more source

Metagenomics Unveils Posidonia oceanica “Banquettes” as a Potential Source of Novel Bioactive Compounds and Carbohydrate Active Enzymes (CAZymes)

mSystems, 2021
Posidonia oceanica is a long-living and very slow-growing marine seagrass endemic to the Mediterranean Sea that forms large amounts of leaf material and rhizomes, which can reach the shore and build important banks known as “banquettes.” These banquettes
Esther Rubio-Portillo, Ana-Belen Martin-Cuadrado, A. Ramos-Esplá, J. Antón   +3 more
semanticscholar   +1 more source