Results 91 to 100 of about 5,264 (155)

cgDist: Nucleotide-level distance calculation from cgMLST allelic profiles. [PDF]

NAR Genom Bioinform
de Ruvo A, Castelli P, Bucciacchio A, Mangone I, Mixão V, Borges V, Flammini M, Radomski N, Di Pasquale A.   +8 more
europepmc   +1 more source

Core genome and whole genome multi-locus sequence typing of <i>Cronobacter</i> isolates. [PDF]

Microbiol Spectr
Joseph LA, Krishnan K, Walters C, Im MS, Coninck DIMD, Im SB, Williams GM, Katz LS, Hise KB, Carleton HA, Lee CC.   +10 more
europepmc   +1 more source

Investigating the population structure of Moraxella catarrhalis using a cgMLST scheme and LIN code system

Moraxella catarrhalis is an important cause of infectious exacerbations of chronic obstructive pulmonary disease and otitis media. To investigate the population structure of M.
Bray, James E, Jolley, Keith A, Sheppard, Anna E, Zar, Heather J, Ah Tow, Lemese, Patel, Fadheela, Yassine, Iman, Allen, Veronica, Maiden, Martin CJ, Nicol, Mark P, Brueggemann, Angela B, Jansen van Rensburg , Melissa J   +11 more
core   +1 more source

Single-isolate genomic characterization and cgMLST allelic comparison of a bovine mastitis-associated <i>Staphylococcus aureus</i> ST151 isolate from Kazakhstan. [PDF]

Front Vet Sci
Suchshikh V, Nurpeisova A, Begassyl K, Karimov A, Kanatov B, Akshalova P, Zheney M, Yessenaliyeva A, Lessov B, Mustafin B, Dyussenov S, Rametov N, Aldayarov N, Tlegenova Z, Yussupov M, Nissanova R, Kassenov M, Abay Z.   +17 more
europepmc   +1 more source

A large number of variants of <i>Corynebacterium diphtheriae c</i>ausing diphtheria outbreaks in Indonesia, 2010-2017. [PDF]

PeerJ
Sunarno S, Nursofiah S, Amalia N, Hartoyo Y, Puspandari N, Lienggonegoro LA, Saraswati RD, Febriyana D, Febrianti T, Khariri K, Rukminiati Y, Sariadji K, Maha MS, Maladan Y, Noviantari A, Lestari CSW, Zainuri M, Multihartina P, Pratama R, Siswanto S.   +19 more
europepmc   +1 more source

Nationwide outbreak of <i>Salmonella</i> Enteritidis linked to consumption of pumpkin seeds, France, 2026. [PDF]

Euro Surveill
Jones G, Laurent E, Fougère E, Fredricksen N, Kojfer-Lomont C, Puzin L, Belichon S, Petrova A, Bur A, de Valk H, Silveira L, Kornschober C, Ragimbeau C, Bonifait L, Moura A.   +14 more
europepmc   +1 more source

Genomic Epidemiology of Salmonella enterica Serovar Hadar Strain Linked to Poultry-Associated Salmonellosis Outbreaks, United States. [PDF]

Emerg Infect Dis
Xiaoli L, Griswold T, Stapleton GS, Katz LS, Ellison Z, Tagg KA, Webb HE, Benedict K, Chen JC.   +8 more
europepmc   +1 more source

Evaluation of Fourier transform infrared spectroscopy as a first-line surveillance typing tool for <i>Serratia</i> spp. isolates derived from clinical materials. [PDF]

Front Antibiot
Lüdecke T, Hunfeld KP.
europepmc   +1 more source

Applicability of Nanopore-only whole-genome sequencing for <i>Pseudomonas aeruginosa</i> outbreak investigation in the ICU setting: a multicentric study. [PDF]

J Clin Microbiol
Dingemans J, Vandersanden S, Hilkens P, Godelaine J, Magerman K, Crombé F, De Geyter D, Boel A, Bruynseels P, Frans J, Vandecandelaere P, Van den Abeele AM, Cartuyvels R.   +12 more
europepmc   +1 more source

Genomic surveillance of multidrug-resistant Enterobacterales in a long-term care facility in Northern Italy based on a point prevalence screening. [PDF]

Sci Rep
Bianconi I, Aschbacher R, Ceschi P, Shehu E, Pedrotti M, Lubian F, Spertini S, Regele D, Pagani E.   +8 more
europepmc   +1 more source