Results 61 to 70 of about 58,079 (318)

The complete chloroplast genome of Allium macrostemon

open access: yesMitochondrial DNA. Part B. Resources, 2019
The complete chloroplast genome of Allium macrostemon Bunge was determined. The length of the complete chloroplast genome is 153,158 bp. The whole chloroplast genome includes four regions: 82,700 bp long single-copy (LSC) and 17,600 bp small single-copy (
Fu-Min Xie   +4 more
doaj   +1 more source

Chloroplast genomes of four Carex species: Long repetitive sequences trigger dramatic changes in chloroplast genome structure

open access: yesFrontiers in Plant Science, 2023
The chloroplast genomes of angiosperms usually have a stable circular quadripartite structure that exhibits high consistency in genome size and gene order.
Shenjian Xu   +7 more
doaj   +1 more source

Chloroplast microsatellites: measures of genetic diversity and the effect of homoplasy [PDF]

open access: yesMolecular Ecology 14, 5 (2005) 1333-41, 2009
Chloroplast microsatellites have been widely used in population genetic studies of conifers in recent years. However, their haplotype configurations suggest that they could have high levels of homoplasy, thus limiting the power of these molecular markers.
arxiv   +1 more source

A panoramic view of cotton resistance to Verticillium dahliae: From genetic architectures to precision genomic selection

open access: yesiMeta, EarlyView.
This study identified 10 reliable quantitative trait loci (QTLs) governing cotton resistance to V. dahliae in various environments through a genome‐wide association analysis (GWAS) using an upland cotton population. The pyramid of these 10 elite alleles reduced the disease index of cotton to V. dahliae from 70 to 20.
Xiaojun Zhang   +30 more
wiley   +1 more source

Characterization of the complete chloroplast genome of Calophaca sinica Rehd.

open access: yesMitochondrial DNA. Part B. Resources, 2020
Calophaca sinica Rehd. is a tree species with high economic value, whose resource has been declining due to unreasonable exploitation. In this study, we sequenced, assembled, and annotated the complete chloroplast genome of C. sinica.
Bin Guo   +6 more
doaj   +1 more source

Gene Similarity-based Approaches for Determining Core-Genes of Chloroplasts [PDF]

open access: yes, 2014
In computational biology and bioinformatics, the manner to understand evolution processes within various related organisms paid a lot of attention these last decades. However, accurate methodologies are still needed to discover genes content evolution. In a previous work, two novel approaches based on sequence similarities and genes features have been ...
arxiv   +1 more source

Whole genome population structure of North Atlantic kelp confirms high‐latitude glacial refugia

open access: yesMolecular Ecology, Volume 31, Issue 24, Page 6473-6488, December 2022., 2022
Abstract Coastal refugia during the Last Glacial Maximum (~21,000 years ago) have been hypothesized at high latitudes in the North Atlantic, suggesting marine populations persisted through cycles of glaciation and are potentially adapted to local environments.
Trevor T. Bringloe   +13 more
wiley   +1 more source

CLAW: An automated Snakemake workflow for the assembly of chloroplast genomes from long-read data.

open access: yesPLoS Computational Biology
Chloroplasts are photosynthetic organelles in algal and plant cells that contain their own genome. Chloroplast genomes are commonly used in evolutionary studies and taxonomic identification and are increasingly becoming a target for crop improvement ...
Aaron L Phillips   +3 more
doaj   +1 more source

The complete chloroplast genome of Allium fistulosum

open access: yesMitochondrial DNA. Part B. Resources, 2019
The complete chloroplast genome of Allium fistulosum (Bunching onion) was determined. The length of the complete chloroplast genome is 153,164 bp. The whole chloroplast genome consists of 82,237 bp long single copy (LSC) and 17,907 bp small single copy ...
Ziyoviddin Yusupov   +5 more
doaj   +1 more source

The complete chloroplast genome sequence of economical standard tea plant, Camellia sinensis L. cultivar Sangmok, in Korea

open access: yesMitochondrial DNA. Part B. Resources, 2020
The complete chloroplast genome sequence of Camellia sinensis L. cultivar Sangmok was determined using high-throughput sequencing technology. We sequenced Sangmok chloroplast genome and performed comparative with 21 published other Camellia and species ...
Dong-Jun Lee   +6 more
doaj   +1 more source

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