Results 71 to 80 of about 3,327 (162)

Training bias and sequence alignments shape protein–peptide docking by AlphaFold and related methods

open access: yesProtein Science, Volume 34, Issue 11, November 2025.
Abstract Protein‐peptide interactions mediate many biological processes. Accurate structural models of protein‐peptide complexes, determined by experiment or computational prediction, are essential for understanding function and designing interaction inhibitors.
Lindsey Guan, Amy E. Keating
wiley   +1 more source

Biological Routes for Biohydrogen Production: A Clean and Carbon‐Free Fuel

open access: yesBiotechnology Journal, Volume 20, Issue 7, July 2025.
Graphical Abstract and Lay Summary Biological routes for hydrogen (H2) production are mainly classified into four pathways: 1) direct bio‐photolysis, 2) indirect bio‐photolysis, 3) photo‐fermentation, and 4) dark fermentation. Of these pathways, dark fermentation produces the highest levels of H2 production.
Minseok Cha   +2 more
wiley   +1 more source

Comparison of transcriptional profiles of Clostridium thermocellum grown on cellobiose and pretreated yellow poplar using RNA-Seq

open access: yesFrontiers in Microbiology, 2014
The anaerobic, thermophilic bacterium, Clostridium thermocellum, secretes multi-protein enzyme complexes, termed cellulosomes, which synergistically interact with the microbial cell surface and efficiently disassemble plant cell wall biomass.
Hui eWei   +13 more
doaj   +1 more source

Enhanced ethanol formation by Clostridium thermocellum via pyruvate decarboxylase

open access: yesMicrobial Cell Factories, 2017
Background Pyruvate decarboxylase (PDC) is a well-known pathway for ethanol production, but has not been demonstrated for high titer ethanol production at temperatures above 50 °C. Result Here we examined the thermostability of eight PDCs.
Liang Tian   +8 more
doaj   +1 more source

Grape Stalks Valorization towards Circular Economy: A Cascade Biorefinery Strategy

open access: yesChemSusChem, Volume 18, Issue 10, May 19, 2025.
A cascade protocol for grape stalks valorization has been proposed, characterized by a multidisciplinary strategy using unconventional techniques and subcritical water as a green solvent, where physical/chemical treatments synergistically interact with biological treatments to obtain added value products from all the biomass components.
Carlotta Valle   +11 more
wiley   +1 more source

Quantitative Modelling of Biohydrogen Production from Indian Agricultural Residues via Dark Fermentation

open access: yesChemistryOpen, Volume 14, Issue 5, May 2025.
This study employs quantitative modelling to assess India's biohydrogen (BioH2) potential from crop residues, revealing a 191 % production boost with pretreatment, reaching ~300 PJ annually. Key surplus‐producing states are identified, highlighting BioH2’s role in energy security and fossil fuel reduction.
Tanmay J. Deka   +5 more
wiley   +1 more source

Biomass augmentation through thermochemical pretreatments greatly enhances digestion of switchgrass by Clostridium thermocellum

open access: yesBiotechnology for Biofuels, 2018
Background The thermophilic anaerobic bacterium Clostridium thermocellum is a multifunctional ethanol producer, capable of both saccharification and fermentation, that is central to the consolidated bioprocessing (CBP) approach of converting ...
Ninad Kothari   +4 more
doaj   +1 more source

Isotope-Assisted Metabolite Analysis Sheds Light on Central Carbon Metabolism of a Model Cellulolytic Bacterium Clostridium thermocellum

open access: yesFrontiers in Microbiology, 2018
Cellulolytic bacteria have the potential to perform lignocellulose hydrolysis and fermentation simultaneously. The metabolic pathways of these bacteria, therefore, require more comprehensive and quantitative understanding.
Wei Xiong   +6 more
doaj   +1 more source

Transcription of Clostridium thermocellum endoglucanase genes celF and celD

open access: yesJournal of Bacteriology, 1991
Transcripts of the Clostridium thermocellum endoglucanase genes celF and celD, encoding endoglucanases F and D, respectively, were characterized. The size of the mRNAs was about 2.35 kb for celF and 2.1 kb for celD, indicating monocistronic transcription of both genes.
S, Mishra, P, Béguin, J P, Aubert
openaire   +3 more sources

The effect of switchgrass loadings on feedstock solubilization and biofuel production by Clostridium thermocellum

open access: yesBiotechnology for Biofuels, 2017
Background Efficient deconstruction and bioconversion of solids at high mass loadings is necessary to produce industrially relevant titers of biofuels from lignocellulosic biomass.
Tobin J. Verbeke   +2 more
doaj   +1 more source

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