Results 41 to 50 of about 1,107,083 (308)
Analysis of codon usage pattern in Lonicera × heckrottii ‘Gold Flame’ based on chloroplast genome
Notulae Botanicae Horti Agrobotanici Cluj-Napoca, 2022 Codon usage bias (CUB) was a unique feature of the genome, and revealing chloroplast genome codon usage bias can provide useful information for the evolution of plant species.
Jiaqiang ZHANG +3 more
doaj +1 more source
RNA virus attenuation by codon pair deoptimisation is an artefact of increases in CpG/UpA dinucleotide frequencies [PDF]
, 2014 Mutating RNA virus genomes to alter codon pair (CP) frequencies and reduce translation efficiency has been advocated as a method to generate safe, attenuated virus vaccines.
David J Evans +17 more
core +1 more source
Codon usage in plant genes [PDF]
Nucleic Acids Research, 1989 We have examined codon bias in 207 plant gene sequences collected from Genbank and the literature. When this sample was further divided into 53 monocot and 154 dicot genes, the pattern of relative use of synonymous codons was shown to differ between these taxonomic groups, primarily in the use of G + C in the degenerate third base.
E E, Murray, J, Lotzer, M, Eberle
openaire +2 more sources
Genome-wide analysis of codon usage and influencing factors in chikungunya viruses.
PLoS ONE, 2014 Chikungunya virus (CHIKV) is an arthropod-borne virus of the family Togaviridae that is transmitted to humans by Aedes spp. mosquitoes. Its genome comprises a 12 kb single-strand positive-sense RNA.
Azeem Mehmood Butt +2 more
doaj +1 more source
Codon Usage of Hepatitis E Viruses: A Comprehensive Analysis
Frontiers in Microbiology, 2022 Hepatitis E virus (HEV) is an emerging zoonotic pathogen with multiple species and genotypes, which may be classified into human, animal, and zoonotic HEV. Codon usage bias of HEV remained unclear.
Bingzhe Li +5 more
doaj +1 more source
Causes and implications of codon usage bias in RNA viruses. [PDF]
PLoS ONE, 2013 Choice of synonymous codons depends on nucleotide/dinucleotide composition of the genome (termed mutational pressure) and relative abundance of tRNAs in a cell (translational pressure).
Ilya S Belalov, Alexander N Lukashev
doaj +1 more source
Comprehensive Analysis of Codon Usage on Porcine Astrovirus
Viruses, 2020 Porcine astrovirus (PAstV), associated with mild diarrhea and neurological disease, is transmitted in pig farms worldwide. The purpose of this study is to elucidate the main factors affecting codon usage to PAstVs.
Huiguang Wu +4 more
doaj +1 more source
Virology Journal, 2012 Background Influenza A virus (IAV) is a member of the family Orthomyxoviridae and contains eight segments of a single-stranded RNA genome with negative polarity.
Goñi Natalia +7 more
doaj +1 more source