Results 131 to 140 of about 2,755,876 (359)

Genus-Wide Comparative Genomics of Malassezia Delineates Its Phylogeny, Physiology, and Niche Adaptation on Human Skin

PLoS Genetics, 2015
Malassezia is a unique lipophilic genus in class Malasseziomycetes in Ustilaginomycotina, (Basidiomycota, fungi) that otherwise consists almost exclusively of plant pathogens.
Guangxi Wu, He Zhao, Chenhao Li, Menaka Priyadarsani Rajapakse, Wing-Cheong Wong, Jun Xu, C. Saunders, N. Reeder, R. Reilman, A. Scheynius, Sheng Sun, B. Billmyre, Wenjun Li, A. Averette, P. Mieczkowski, J. Heitman, B. Theelen, Markus S. Schröder, P. F. de Sessions, G. Butler, S. Maurer-Stroh, T. Boekhout, N. Nagarajan, T. Dawson   +23 more
semanticscholar   +1 more source

Comparing self‐reported race and genetic ancestry for identifying potential differentially methylated sites in endometrial cancer: insights from African ancestry proportions using machine learning models

Molecular Oncology, EarlyView.
Integrating ancestry, differential methylation analysis, and machine learning, we identified robust epigenetic signature genes (ESGs) and Core‐ESGs in Black and White women with endometrial cancer. Core‐ESGs (namely APOBEC1 and PLEKHG5) methylation levels were significantly associated with survival, with tumors from high African ancestry (THA) showing ...
Huma Asif, J. Julie Kim
wiley   +1 more source

Research Progress of Betalain in Response to Adverse Stresses and Evolutionary Relationship Compared with Anthocyanin

Molecules, 2019
Betalains are applicable to many aspects of life, and their properties, characteristics, extraction and biosynthesis process have been thoroughly studied.
Ge Li, Xiaoqing Meng, Mingku Zhu, Zongyun Li   +3 more
doaj   +1 more source

Molecular Genetic Aspects of Oligodendrogliomas Including Analysis by Comparative Genomic Hybridization [PDF]

, 1999
Sandra H. Bigner, Mark R. Matthews, Binish Rasheed, Rodney N. Wiltshire, Henry S. Friedman, Allan H. Friedman, Timothy T. Stenzel, Donald M. Dawes, Roger E. McLendon, Darell D. Bigner   +9 more
openalex   +1 more source

Comparative genomics and prediction of conditionally dispensable sequences in legume–infecting Fusarium oxysporum formae speciales facilitates identification of candidate effectors

BMC Genomics, 2016
Soil-borne fungi of the Fusarium oxysporum species complex cause devastating wilt disease on many crops including legumes that supply human dietary protein needs across many parts of the globe.
Angela H Williams, Angela H Williams, Mamta Sharma, L. Thatcher, Sarwar Azam, James K. Hane, James K. Hane, Jana Sperschneider, Brendan N Kidd, Jonathan P. Anderson, Jonathan P. Anderson, R. Ghosh, Gagan Garg, J. Lichtenzveig, H. Kistler, Terrance Shea, Sarah K. Young, Sally-Anne Buck, L. Kamphuis, L. Kamphuis, R. Saxena, S. Pande, Li‐Jun Ma, R. Varshney, R. Varshney, Karam B. Singh, Karam B. Singh   +26 more
semanticscholar   +1 more source

The atypical KRASQ22K mutation directs TGF‐β response towards partial epithelial‐to‐mesenchymal transition in patient‐derived colorectal cancer tumoroids

Molecular Oncology, EarlyView.
TGF‐β has a complex role in cancer, exhibiting both tumor‐suppressive and tumor‐promoting properties. Using a series of differentiated tumoroids, derived from different stages and mutational background of colorectal cancer patients, we replicate this duality of TGF‐β in vitro. Notably, the atypical but highly aggressive KRASQ22K mutation rendered early‐
Theresia Mair, Philip König, Milena Mijović, Jessica Kalla, Anil Baskan, Loan Tran, Kristina Draganić, Pedro Morata Saldaña, Carlos Uziel Pérez Malla, Janette Pfneissl, Andreas Tiefenbacher, Julijan Kabiljo, Velina S. Atanasova, Lisa Wozelka‐Oltjan, Leonhard Müllauer, Michael Bergmann, Raheleh Sheibani‐Tezerji, Gerda Egger   +17 more
wiley   +1 more source

Comparative Genomic Hybridization Analysis of Adrenocortical Tumors of Childhood¹ [PDF]

, 1999
Bonald C. Figueiredo, Constantine A. Stratakis, Romolo Sandrini, Luiz DeLacerda, Mara A. D. Pianovsky, Christoforos Giatzakis, Hannah Young, Bassem R. Haddad   +7 more
openalex   +1 more source

Comparative genomics reveals insights into avian genome evolution and adaptation

Science, 2014
Birds are the most species-rich class of tetrapod vertebrates and have wide relevance across many research fields. We explored bird macroevolution using full genomes from 48 avian species representing all major extant clades.
Guojie Zhang, Cai Li, Qiye Li, Bo Li, D. Larkin, Chul Lee, Jay F. Storz, Agostinho Antunes, Matthew J. Greenwold, Robert W. Meredith, A. Ödeen, Jianwei Cui, Q. Zhou, Luohao Xu, Hailin Pan, Zongji Wang, Li-jun Jin, Pei Zhang, Haofu Hu, Wei-wei Yang, Jiang Hu, Jin Xiao, Zhikai Yang, Yang Liu, Qiaolin Xie, Hao Yu, J. Lian, Ping Wen, Fang Zhang, Hui Li, Yongli Zeng, Zijun Xiong, Shiping Liu, Long Zhou, Zhiyong Huang, Na An, Jie Wang, Q. Zheng, Yingqi Xiong, Guangbiao Wang, Bosheng Wang, Jingjing Wang, Yu Fan, R. D. da Fonseca, Alonzo Alfaro-Núñez, Mikkel Schubert, L. Orlando, T. Mourier, Jason T. Howard, Ganeshkumar Ganapathy, Andreas R. Pfenning, O. Whitney, M. Rivas, Erina Hara, Julia Smith, M. Farré, Jitendra Narayan, G. Slavov, Michael N Romanov, Rui Borges, J. Machado, Imran Khan, M. Springer, J. Gatesy, F. Hoffmann, J. Opazo, O. Håstad, R. Sawyer, Heebal Kim, Kyu-Won Kim, H. Kim, Seoae Cho, Ning Li, Yinhua Huang, M. Bruford, Xiangjiang Zhan, Andrew Dixon, Mads F Bertelsen, E. Derryberry, Wesley C. Warren, Richard K. Wilson, Shengbin Li, David A. Ray, R. Green, Stephen J. O’Brien, Darren K. Griffin, Warren E. Johnson, David Haussler, Oliver A. Ryder, E. Willerslev, G. Graves, P. Alström, J. Fjeldså, D. Mindell, Scott V. Edwards, E. Braun, C. Rahbek, David W Burt, P. Houde, Yong Zhang, Han Yang, J. Wang, Erich D. Jarvis, M. T. P. Gilbert, J. Wang, Emanuel Maldonado   +105 more
semanticscholar   +1 more source

A large‐scale retrospective study in metastatic breast cancer patients using circulating tumour DNA and machine learning to predict treatment outcome and progression‐free survival

Molecular Oncology, EarlyView.
There is an unmet need in metastatic breast cancer patients to monitor therapy response in real time. In this study, we show how a noninvasive and affordable strategy based on sequencing of plasma samples with longitudinal tracking of tumour fraction paired with a statistical model provides valuable information on treatment response in advance of the ...
Emma J. Beddowes, Mario Ortega Duran, Solon Karapanagiotis, Alistair Martin, Meiling Gao, Riccardo Masina, Ramona Woitek, James Tanner, Fleur Tippin, Justine Kane, Jonathan Lay, Anja Brouwer, Stephen‐John Sammut, Suet‐Feung Chin, Davina Gale, Dana W. Y. Tsui, Sarah‐Jane Dawson, Nitzan Rosenfeld, Maurizio Callari, Oscar M. Rueda, Carlos Caldas   +20 more
wiley   +1 more source

Comparative genomics identifies the Magnaporthe oryzae avirulence effector AvrPi9 that triggers Pi9-mediated blast resistance in rice.

New Phytologist, 2015
We identified the Magnaporthe oryzae avirulence effector AvrPi9 cognate to rice blast resistance gene Pi9 by comparative genomics of requisite strains derived from a sequential planting method.
Jun Wu, Yanjun Kou, Jiandong Bao, Ya Li, Mingzhi Tang, Xiaoli Zhu, A. Ponaya, G. Xiao, Jinbin Li, Chenyun Li, Min-Young Song, C. Cumagun, Q. Deng, G. Lu, J. Jeon, Naweed I. Naqvi, Bo Zhou   +16 more
semanticscholar   +1 more source