Results 21 to 30 of about 21,281 (164)

Strand-Specific Patterns of Codon Usage Bias Across Cressdnaviricota

Frontiers in Virology, 2022
The rapidly expanding phylum Cressdnaviricota contains circular, Rep-encoding single-stranded (CRESS) DNA viruses that are organized within seven established families, but many CRESS DNA virus sequences are not taxonomically defined. We hypothesized that
Alvin Crespo-Bellido, Siobain Duffy
doaj   +1 more source

Diversity of CRESS DNA Viruses in Squamates Recapitulates Hosts Dietary and Environmental Sources of Exposure

Microbiology Spectrum, 2022
Replication-associated protein (Rep)-encoding single-stranded (CRESS) DNA viruses comprise viruses with covalently closed, circular, single-stranded DNA (ssDNA) genomes, and are considered the smallest known autonomously replicating, capsid-encoding ...
Paolo Capozza, Gianvito Lanave, Georgia Diakoudi, Francesco Pellegrini, Roberta Cardone, Violetta Iris Vasinioti, Nicola Decaro, Gabriella Elia, Cristiana Catella, Alberto Alberti, Krisztián Bányai, Jairo Alfonso Mendoza-Roldan, Domenico Otranto, Canio Buonavoglia, Vito Martella   +14 more
doaj   +1 more source

Detection of human feces pecovirus in newly diagnosed HIV patients in Brazil.

PLoS ONE, 2022
Circular single stranded DNA viruses (CRESS DNA) encoding a homologous replication-associated protein (REP) have been identified in most of eukaryotic groups.
Rodrigo Lopes Sanz Duro, Robson Dos Santos Souza Marinho, Valquíria Lima Santana, Elis Muriel Marques Monti, Humberto Onias, Elaine Monteiro Matsuda, Ricardo Sobhie Diaz, Karina Rente Isidoro, Eric Delwart, Élcio Leal, Shirley Vasconcelos Komninakis   +10 more
doaj   +1 more source

Virus discovery in all three major lineages of terrestrial arthropods highlights the diversity of single-stranded DNA viruses associated with invertebrates [PDF]

PeerJ, 2018
Viruses encoding a replication-associated protein (Rep) within a covalently closed, single-stranded (ss)DNA genome are among the smallest viruses known to infect eukaryotic organisms, including economically valuable agricultural crops and livestock ...
Karyna Rosario, Kaitlin A. Mettel, Bayleigh E. Benner, Ryan Johnson, Catherine Scott, Sohath Z. Yusseff-Vanegas, Christopher C.M. Baker, Deby L. Cassill, Caroline Storer, Arvind Varsani, Mya Breitbart   +10 more
doaj   +2 more sources

Metagenomic Identification of a Novel Zoonotic Gemykibivirus in a Diarrheic Pig in China. [PDF]

Transbound Emerg Dis
Gemykibiviruses are circular, replication‐associated protein (REP) encoding single‐stranded DNA (ssDNA) viruses classified within the genus Gemykibivirus of the family Genomoviridae. In recent years, several gemykibiviruses have been detected in humans presenting with clinical symptoms, such as encephalitis, respiratory illness, sepsis, pericarditis ...
Wang W, Yuan L, Zhang M, Zhao Q, Pang W, Sun D, Jia X, Tan F, Niu T, Tian K, Li X.   +10 more
europepmc   +2 more sources

New Type of Papillomavirus and Novel Circular Single Stranded DNA Virus Discovered in Urban Rattus norvegicus Using Circular DNA Enrichment and Metagenomics. [PDF]

PLoS ONE, 2015
Rattus norvegicus (R. norvegicus) are ubiquitous and their presence has several effects on the human populations in our urban areas on a global scale.
Thomas Arn Hansen, Helena Fridholm, Tobias Guldberg Frøslev, Kristín Rós Kjartansdóttir, Eske Willerslev, Lars Peter Nielsen, Anders Johannes Hansen   +6 more
doaj   +1 more source

Highly Sensitive Virome Characterization of Aedes aegypti and Culex pipiens Complex from Central Europe and the Caribbean Reveals Potential for Interspecies Viral Transmission

Pathogens, 2020
Mosquitoes are the most important vectors for arthropod-borne viral diseases. Mixed viral infections of mosquitoes allow genetic recombination or reassortment of diverse viruses, turning mosquitoes into potential virologic mixing bowls. In this study, we
Jakob Thannesberger, Nicolas Rascovan, Anna Eisenmann, Ingeborg Klymiuk, Carina Zittra, Hans-Peter Fuehrer, Thea Scantlebury-Manning, Marquita Gittens-St.Hilaire, Shane Austin, Robert Clive Landis, Christoph Steininger   +10 more
doaj   +1 more source

Metagenomic analysis of herbivorous mammalian viral communities in the Northwest Plateau

BMC Genomics, 2023
Background Mammals are potential hosts for many infectious diseases. However, studies on the viral communities of herbivorous mammals in the Northwest Plateau are limited.
Jiamin Pan, Likai Ji, Haisheng Wu, Xiaochun Wang, Yan Wang, Yan Wu, Shixing Yang, Quan Shen, Yuwei Liu, Wen Zhang, Keshan Zhang, Tongling Shan   +11 more
doaj   +1 more source

Mechanism of DNA Interaction and Translocation by the Replicase of a Circular Rep-Encoding Single-Stranded DNA Virus

mBio, 2021
Circular Rep-encoding single-stranded DNA (CRESS-DNA) viruses infect members from all three domains of life (Archaea, Prokarya, and Eukarya). The replicase (Rep) from these viruses is responsible for initiating rolling circle replication (RCR) of their ...
Elvira Tarasova, Sonali Dhindwal, Matthew Popp, Sakeenah Hussain, Reza Khayat   +4 more
doaj   +1 more source

Gut Virome of Tibetan Pigs Reveals the Diversity, Composition, and Distribution of Potential Novel Viruses/Variants. [PDF]

Transbound Emerg Dis
As a local breed adapted to the extreme environment of the Tibetan Plateau, Tibetan pigs have not yet been systematically characterized in terms of their gut viral communities. In this study, we applied viral metagenomics to sequence fecal samples from 191 Tibetan pigs (including both healthy and diarrheal individuals) across four farms in Nyingchi ...
Chen J, Gong G, Huang S, Chen Y, Yang S, Shen Q, Wang X, Wu P, Liu Y, Ji L, Zhang W.   +10 more
europepmc   +2 more sources