Results 61 to 70 of about 3,685 (173)

Accurate Prediction of Central Conventional Chondrosarcoma Risk and Outcome Using Methylation Profiling: CHROME

open access: yesGenes, Chromosomes and Cancer, Volume 65, Issue 8, August 2026.
ABSTRACT Chondrosarcomas are malignant cartilage‐forming bone tumors with heterogeneous behavior, making prognostication and clinical management challenging. Histological grading is the primary tool for predicting clinical outcomes in conventional chondrosarcoma.
Sara Cardoso   +15 more
wiley   +1 more source

Whole genome sequencing of historical specimens from the world's largest fungal collection yields high‐quality assemblies

open access: yesNew Phytologist, Volume 251, Issue 2, Page 752-767, July 2026.
Summary High‐throughput molecular studies of museum specimens (museomics) have great potential in biodiversity research, but fungal historical collections have scarcely been examined, leading to no comprehensive methodological assessments. Here we present a whole genome sequencing (WGS) project conducted at the Fungarium of the Royal Botanic Gardens ...
Torda Varga   +24 more
wiley   +1 more source

De Bruijn sequences and De Bruijn graphs for a general language

open access: yesInformation Processing Letters, 2005
zbMATH Open Web Interface contents unavailable due to conflicting licenses.
openaire   +3 more sources

Evolutionary Patterns of the Genes Involved in the Integrity and Segregation of Chromosomes in Sawflies (Hymenoptera: Symphyta)

open access: yesEcology and Evolution, Volume 16, Issue 6, June 2026.
This study identifies and characterizes the genes encoding cohesin and condensin complexes across Symphytan superfamilies, revealing their structural and functional roles with conserved motifs in maintaining genome stability. Phylogenetic analyses indicate that SMC genes originated from ancient duplication events, with notable gene loss (e.g., CAPG2 ...
Ayşe Rümeysa Nalça   +1 more
wiley   +1 more source

TraRECo: a greedy approach based de novo transcriptome assembler with read error correction using consensus matrix

open access: yesBMC Genomics, 2018
Background The challenges when developing a good de novo transcriptome assembler include how to deal with read errors and sequence repeats. Almost all de novo assemblers utilize a de Bruijn graph, with which complexity grows linearly with data size while
Seokhyun Yoon   +3 more
doaj   +1 more source

From short to long: The impact of read length on metagenome assembly and binning

open access: yesMethods in Ecology and Evolution, Volume 17, Issue 6, Page 1788-1798, June 2026.
Abstract Metagenome sequencing not only plays a pivotal role in unravelling the genetic diversity and functional potential of microbial communities but also facilitates the discovery of genome context for microbial dark matter. This study presents a comparative analysis of metagenome sequencing strategies, focusing on the impact of read length on the ...
Xi Peng   +7 more
wiley   +1 more source

The Collatz conjecture and De Bruijn graphs

open access: yesIndagationes Mathematicae, 2013
9 pages, 8 ...
Thijs Laarhoven, Benne de Weger
openaire   +4 more sources

A Fault-Tolerant Routing Algorithm for Wireless Sensor Networks Based on the Structured Directional de Bruijn Graph

open access: yesCybernetics and Information Technologies, 2016
Wireless Sensor Network (WSNs) nodes with low energy, run out of energy easily and stop working, which results then in routing failures and communication blocking.
Lu Chuiwei, Hu Defa
doaj   +1 more source

Brownotate, a Comprehensive Solution to Generate Protein Sequence Databases for Any Species

open access: yesPROTEOMICS, Volume 26, Issue 5, Page 13-26, May 2026.
ABSTRACT Proteomics is strengthening research in biology and the diversification of the model organisms studied is very promising for fully understanding the complexity of biological principles. However, the lack of protein sequence databases for many species is a major bottleneck.
Adrien Brown   +4 more
wiley   +1 more source

In‐and‐Out: Algorithmic Diffusion for Sampling Convex Bodies

open access: yesRandom Structures &Algorithms, Volume 68, Issue 3, May 2026.
ABSTRACT We present a new random walk for uniformly sampling high‐dimensional convex bodies. It achieves state‐of‐the‐art runtime complexity with stronger guarantees on the output than previously known, namely in Rényi divergence (which implies TV, 𝒲2, KL, χ2$$ {\chi}^2 $$).
Yunbum Kook   +2 more
wiley   +1 more source

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