Results 31 to 40 of about 1,712 (131)

Alu element mutation spectra: Molecular clocks and the effect of DNA methylation [PDF]

open access: yes, 2004
In primate genomes more than 40% of CpG islands are found within repetitive elements. With more than one million copies in the human genome, the Alu family of retrotransposons represents the most successful short interspersed element (SINE) in primates ...
Batzer, Mark A.   +5 more
core   +2 more sources

Contribution of DNA/RNA Structures Formed by Expanded CGG/CCG Repeats Within the FMR1 Locus in the Pathogenesis of Fragile X‐Associated Disorders

open access: yesWIREs RNA, Volume 15, Issue 6, November/December 2024.
CGG repeat expansion may occur in the 5′ untranslated region of the FMR1 gene. The resulting mutant DNA and RNA with expanded CGG repeats form stable secondary structures that can interfere with numerous cellular processes. Depending on the length of the CGG repeats, different molecular phenotypes may occur, which in turn determine different clinical ...
Izabela Broniarek   +2 more
wiley   +1 more source

Sulforaphane‐induced metabolomic responses with epigenetic changes in estrogen receptor positive breast cancer cells

open access: yesFEBS Open Bio, Volume 8, Issue 12, Page 2022-2034, December 2018., 2018
Sulforaphane (SFN) may be a promising chemopreventive agent. We investigated the metabolic profiles of MCF‐7 cells with estrogen (E2) and/or SFN treatment by GC‐MS and UPLC‐Orbitrap‐MS methods. The data showed that SFN can reverse the E2‐induced changes in amino acid, purine, and folic acid metabolism, as well as glycolysis and energy metabolism, and ...
Shuyuan Cao   +5 more
wiley   +1 more source

DHODH: A Promising Target in the Treatment of T-Cell Acute Lymphoblastic Leukemia [PDF]

open access: yes, 2023
Patients with relapsed or refractory T-cell acute lymphoblastic leukemia (T-ALL) have a poor prognosis with few therapeutic options. With the goal of identifying novel therapeutic targets, we used data from the Dependency Map project to identify ...
Alexe, Gabriela   +9 more
core   +2 more sources

On the chemistry of sunlight‐induced DNA lesions: A perspective on the alkaline chemical‐induced reactivities of photo‐damaged pyrimidine intra‐strand dimers

open access: yesPhotochemistry and Photobiology, Volume 100, Issue 6, Page 1698-1712, November/December 2024.
UV photoexcitation of adjacent intra‐strand pyrimidines in DNA can promote their covalent dimerization at sites such as 5′‐T‐p‐T‐3′ and 5′‐T‐p‐C‐3′. This photo‐reactivity leads, notably, to cyclobutane pyrimidine dimers, pyrimidine (6‐4) pyrimidone photoproducts (6‐4PPs), and, in bacterial endospores, the spore photoproduct, SP.
Ritu Chaturvedi, Eric C. Long
wiley   +1 more source

Risks for public health related to the presence of furan and methylfurans in food

open access: yesEFSA Journal, Volume 15, Issue 10, October 2017., 2017
Abstract The European Commission asked EFSA for a scientific evaluation on the risk to human health of the presence of furan and methylfurans (2‐methylfuran, 3‐methylfuran and 2,5‐dimethylfuran) in food. They are formed in foods during thermal processing and can co‐occur.
EFSA Panel on Contaminants in the Food Chain (CONTAM)   +29 more
wiley   +1 more source

The Excited State Dynamics of a Mutagenic Guanosine Etheno Adduct Investigated by Femtosecond Fluorescence Spectroscopy and Quantum Mechanical Calculations

open access: yesChemistry – A European Journal, Volume 30, Issue 49, September 2, 2024.
The mutagenic etheno adduct of guanine exhibits a peculiar behavior of its lowest singlet excited state. The two independent and short‐lived emission bands revealed by femtosecond upconversion fluorescence are associated with two strongly coupled bright minima of different geometry.
Paloma Lizondo‐Aranda   +4 more
wiley   +1 more source

Multiscale Systems‐Pharmacology Pipeline to Assess the Prophylactic Efficacy of NRTIs Against HIV‐1

open access: yesCPT: Pharmacometrics &Systems Pharmacology, Volume 5, Issue 7, Page 377-387, July 2016., 2016
While HIV‐1 continues to spread, the use of antivirals in preexposure prophylaxis (PrEP) has recently been suggested. Here we present a modular systems pharmacology modeling pipeline, predicting PrEP efficacy of nucleotide reverse transcriptase inhibitors (NRTIs) at the scale of reverse transcription, target‐cell, and systemic infection and after ...
S Duwal, V Sunkara, M von Kleist
wiley   +1 more source

Recognition of O6-benzyl-2′-deoxyguanosine by a perimidinone-derived synthetic nucleoside: a DNA interstrand stacking interaction [PDF]

open access: yes, 2017
The 2′-deoxynucleoside containing the synthetic base 1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)-tetrahydrofuran-2-yl)-1H-perimidin-2(3H)-one] (dPer) recognizes in DNA the O6-benzyl-2′-deoxyguanosine nucleoside (O6-Bn-dG), formed by exposure to N ...
Dhummakupt, Elizabeth   +7 more
core  

Multiple Factors Determine the Oncolytic or Carcinogenic Effects of TLRs Activation in Cancer

open access: yesJournal of Immunology Research, Volume 2024, Issue 1, 2024.
Toll‐like receptors (TLRs) belong to a germline‐encoded protein family. These are pattern recognition receptors. They sense pathogen‐associated molecular patterns (PAMPs). When this occurs, activation of the NF‐ĸB pathway follows. This triggers the innate immune response of the host.
Yingxiang Yang   +4 more
wiley   +1 more source

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