Results 21 to 30 of about 1,587,193 (206)

¹³C-DNA-SIP Distinguishes the Prokaryotic Community That Metabolizes Soybean Residues Produced Under Different CO₂ Concentrations. [PDF]

Front Microbiol, 2019
The amendment of crop residues produced under elevated CO2 (eCO2) may alter soil microbial community structure and their functions on residue decomposition and carbon (C) cycling in soil. The key to understanding this process is to elucidate the structure of prokaryotic communities that metabolize crop residues derived from eCO2.
Wang Y, Yu Z, Li Y, Wang G, Tang C, Liu X, Liu J, Xie Z, Jin J.   +8 more
europepmc   +5 more sources

Application of stable isotope probing (DNA-SIP) in the identification of cellulolytic soil bacteria and fungi

, 2010
Cellulose is the most abundant organic polymer on the earth, and represents a huge source of energy for microorganisms. The ability to degrade cellulose is widespread among fungi and bacteria and can take place under aerobic and anaerobic conditions.
Haichar, Feth El Zahar, Achouak, Wafa
openaire   +2 more sources

Simulating metagenomic stable isotope probing datasets with MetaSIPSim

BMC Bioinformatics, 2020
Background DNA-stable isotope probing (DNA-SIP) links microorganisms to their in-situ function in diverse environmental samples. Combining DNA-SIP and metagenomics (metagenomic-SIP) allows us to link genomes from complex communities to their specific ...
Samuel E. Barnett, Daniel H. Buckley
doaj   +1 more source

Unearthing the microbial ecology of soil carbon cycling with DNA-SIP [PDF]

, 2015
Introductory Paragraph We explored the microbial contributions to decomposition using a sophisticated approach to DNA Stable Isotope Probing (SIP). Our experiment evaluated the dynamics and ecological characteristics of functionally defined microbial groups that metabolize labile and structural C in soils. We added to
Pepe-Ranney, Charles, Campbell, Ashley N, Koechli, Chantal, Berthrong, Sean T, Buckley, Daniel H   +4 more
openaire   +1 more source

Hydrocarbon-degrading bacteria enriched by the Deepwater Horizon oil spill identified by cultivation and DNA-SIP [PDF]

The ISME Journal, 2013
Abstract The massive influx of crude oil into the Gulf of Mexico during the Deepwater Horizon (DWH) disaster triggered dramatic microbial community shifts in surface oil slick and deep plume waters. Previous work had shown several taxa, notably DWH Oceanospirillales, Cycloclasticus and Colwellia, were found to be enriched in these ...
Gutierrez, Tony, Singleton, David R, Berry, David, Yang, Tingting, Aitken, Michael D, Teske, Andreas   +5 more
openaire   +2 more sources

Prevalence and association of Epstein-Barr virus infection with sinonasal inverted papilloma and sinonasal squamous cell carcinoma in the northeastern Thai population

Infectious Agents and Cancer, 2020
Aims Sinonasal inverted papillomas (SIP) and sinonasal squamous cell carcinomas (SNSCC) are sinonasal tumors with unclear etiology and pathogenesis. Epstein-Barr virus (EBV) has been detected in these tumors but information concerning their association ...
Thawaree Nukpook, Tipaya Ekalaksananan, Watchareporn Teeramatwanich, Natcha Patarapadungkit, Surachat Chaiwiriyakul, Patravoot Vatanasapt, Sirinart Aromseree, Chamsai Pientong   +7 more
doaj   +1 more source

ALEX: Improving SIP Support in Systems with Multiple Network Addresses [PDF]

, 2005
The successful and increasingly adopted session initiation protocol (SIP) does not adequately support hosts with multiple network addresses, such as dual-stack (IPv4-IPv6) or IPv6 multi-homed devices. This paper presents the Address List Extension (ALEX)
F. Risso, Baldi, Mario, Marinone, F., Risso, Fulvio Giovanni Ottavio, M. Baldi, Torrero, Livio, F. Marinone, L. Torrero, MARINONE F   +8 more
core   +1 more source

Establishing Host-Virus Link Through Host Metabolism: Viral DNA SIP Validation Using T4 Bacteriophage and E. coli. [PDF]

Curr Microbiol
Abstract DNA Stable Isotope Probing is emerging as a potent methodology for investigating host–virus interactions, based on the essential reliance of viruses on host organisms for the production of virions. Despite the anticipated link between host isotopic compositions and the generated virions, the application ...
Ngo VQH, Sotomski M, Guenne A, Mariadassou M, Krupovic M, Enault F, Bize A.   +6 more
europepmc   +5 more sources

Providing End-to-End Connectivity to SIP User Agents Behind NATs [PDF]

, 2008
The widespread diffusion of private networks in SOHO scenarios is fostering an increased deployment of Network Address Translators (NATs). The presence of NATs seriously limits end-to-end connectivity and prevents protocols like the Session Initiation ...
F. Risso, DE MARCO L, Baldi, Mario, De Marco, L., Risso, Fulvio Giovanni Ottavio, M. Baldi, Torrero, Livio, L. De Marco, L. Torrero   +8 more
core   +1 more source

Application of GelGreen™ in Cesium Chloride Density Gradients for DNA-Stable Isotope Probing Experiments.

PLoS ONE, 2017
In this study, GelGreen™ was investigated as a replacement for SYBR® Safe to stain DNA in cesium chloride (CsCl) density gradients for DNA-stable isotope probing (SIP) experiments.
Jingfeng Gao, Kailing Pan, Hongyu Li, Xiaoyan Fan, Lixin Sun, Shujun Zhang, Yongqing Gao   +6 more
doaj   +1 more source