Results 21 to 30 of about 736,909 (260)
Study on DNA Storage Encoding Based IAOA under Innovation Constraints
Current Issues in Molecular Biology, 2023 With the informationization of social processes, the amount of related data has greatly increased, making traditional storage media unable to meet the current requirements for data storage. Due to its advantages of a high storage capacity and persistence,
Haigui Du +3 more
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Classifying Coding DNA with Nucleotide Statistics
Bioinformatics and Biology Insights, 2009 In this report, we compared the success rate of classification of coding sequences (CDS) vs. introns by Codon Structure Factor (CSF) and by a method that we called Universal Feature Method (UFM).
Nicolas Carels, Diego Frías
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Fitting Markov property to genetic sequences
Lietuvos Matematikos Rinkinys, 2023 In this paper DNA sequents are modelled as discrete-state Markov chains. Statistical data is presented in contingency tables form. The generalized logit model is used to test the first-order Markov property for all coding and non-coding subsequences of ...
Jurgita Židanavičiūtė +1 more
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Investigations of oligonucleotide usage variance within and between prokaryotes. [PDF]
PLoS Computational Biology, 2008 Oligonucleotide usage in archaeal and bacterial genomes can be linked to a number of properties, including codon usage (trinucleotides), DNA base-stacking energy (dinucleotides), and DNA structural conformation (di- to tetranucleotides).
Jon Bohlin +2 more
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Codes for DNA sequence profiles [PDF]
2015 IEEE International Symposium on Information Theory (ISIT), 2015 27 pages, 5 figures.
Han Mao Kiah +2 more
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Codes for DNA storage channels [PDF]
2015 IEEE Information Theory Workshop (ITW), 2015 32 pages, 5 ...
Han Mao Kiah +2 more
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Malaya Journal of Matematik, 2023 In this paper, by using three different methods, the DNA codes are obtained from some codes over a family of the rings $D_{i}=D_{1}\left[ w_{2},...,w_{i}\right]/\left\langle w_{i}^{2}-w_{i},w_{i}w_{j}-w_{j}w_{i}\right\rangle $, where $% i=2,...,r,j=1,2,...r$ and $D_{1}=F_{2}+uF_{2}+w_{1}(F_{2}+uF_{2}),u^{2}=0,w_{1}^{2}=w_{1},uw_{1}=w_{1}u, F_{2}=\{0,1\}
null Abdullah DERTLI +1 more
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Reversible $$G^k$$-codes with applications to DNA codes
Designs, Codes and Cryptography, 2022 In this paper, we give a matrix construction method for designing DNA codes that come from group matrix rings. We show that with our construction one can obtain reversible $G^k$-codes of length $kn,$ where $k, n \in \mathbb{N},$ over the finite commutative Frobenius ring $R.$ We employ our construction method to obtain many DNA codes over $\mathbb{F}_4$
Adrian Korban +2 more
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Non-coding RNAs and epigenome: de novo DNA methylation, allelic exclusion and X-inactivation [PDF]
The Ukrainian Biochemical Journal, 2013 Non-coding RNAs are widespread class of cell RNAs. They participate in many important processes in cells – signaling, posttranscriptional silencing, protein biosynthesis, splicing, maintenance of genome stability, telomere lengthening, X-inactivation ...
V. A. Halytskiy, S. V. Komisarenko
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BRICS Report Series, 1998 We discuss a model for the evolutionary distance between two coding DNA sequences which specializes to the DNA/protein model proposed in Hein [3]. We discuss the DNA/protein model in details and present a quadratic time algorithm that computes an optimal alignment of two coding DNA sequences in the model under the assumption of affine gap cost.
Christian N. S. Pedersen +2 more
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