Results 41 to 50 of about 7,033 (174)

Poxvirus uracil-DNA glycosylase-An unusual member of the family I uracil-DNA glycosylases. [PDF]

open access: yesProtein Sci, 2016
AbstractUracil‐DNA glycosylases are ubiquitous enzymes, which play a key role repairing damages in DNA and in maintaining genomic integrity by catalyzing the first step in the base excision repair pathway. Within the superfamily of uracil‐DNA glycosylases family I enzymes or UNGs are specific for recognizing and removing uracil from DNA.
Schormann N   +8 more
europepmc   +4 more sources

Plant and fungal Fpg homologs are formamidopyrimidine DNA glycosylases but not 8-oxoguanine DNA glycosylases [PDF]

open access: yesDNA Repair, 2009
Formamidopyrimidine DNA glycosylase (Fpg) and endonuclease VIII (Nei) share an overall common three-dimensional structure and primary amino acid sequence in conserved structural motifs but have different substrate specificities, with bacterial Fpg proteins recognizing formamidopyrimidines, 8-oxoguanine (8-oxoG) and its oxidation products ...
Scott D, Kathe   +8 more
openaire   +2 more sources

The trajectory of intrahelical lesion recognition and extrusion by the human 8-oxoguanine DNA glycosylase

open access: yesNature Communications, 2020
DNA glycosylases are lesion-specific enzymes that recognize specific nucleobase damages and catalyze their excision through cleavage of the glycosidic bond.
Uddhav K. Shigdel   +6 more
doaj   +1 more source

Characterization of demethylating DNA glycosylase ROS1 from Nicotiana tabacum L.

open access: yesВавиловский журнал генетики и селекции, 2022
One of the main mechanisms of epigenetic regulation in higher eukaryotes is based on the methylation of cytosine at the C5 position with the formation of 5-methylcytosine (mC), which is further recognized by regulatory proteins.
D. V. Petrova   +3 more
doaj   +1 more source

Biogenesis of Iron–Sulfur Clusters and Their Role in DNA Metabolism

open access: yesFrontiers in Cell and Developmental Biology, 2021
Iron–sulfur (Fe/S) clusters (ISCs) are redox-active protein cofactors that their synthesis, transfer, and insertion into target proteins require many components. Mitochondrial ISC assembly is the foundation of all cellular ISCs in eukaryotic cells.
Ruifeng Shi   +6 more
doaj   +1 more source

Expression patterns of Neil3 during embryonic brain development and neoplasia

open access: yesBMC Neuroscience, 2009
Background The base excision repair pathway is responsible for repairing small DNA base lesions caused by endogenous and exogenous damaging agents. Repair is initiated by DNA glycosylases that recognize and remove the lesions.
Bjørås Magnar   +6 more
doaj   +1 more source

Dataset for dynamics and conformational changes in human NEIL2 protein analyzed by integrative structural biology approach

open access: yesData in Brief, 2022
This work presents new data on human endonuclease VIII-like 2 protein (hNEIL2), a part of DNA glycosylases of the helix–two-turn–helix structural superfamily. While X-ray structure of oNEIL2 (opossum Monodelphis) was resolved partially [1], the structure
Polina V. Zhdanova   +4 more
doaj   +1 more source

Active DNA Demethylation Mediated by DNA Glycosylases [PDF]

open access: yesAnnual Review of Genetics, 2009
Active DNA demethylation is involved in many vital developmental and physiological processes of plants and animals. Recent genetic and biochemical studies in Arabidopsis have demonstrated that a subfamily of DNA glycosylases function to promote DNA demethylation through a base excision-repair pathway.
openaire   +2 more sources

Targeted DNA demethylation in human cells by fusion of a plant 5-methylcytosine DNA glycosylase to a sequence-specific DNA binding domain

open access: yesEpigenetics, 2017
DNA methylation is a crucial epigenetic mark associated to gene silencing, and its targeted removal is a major goal of epigenetic editing. In animal cells, DNA demethylation involves iterative 5mC oxidation by TET enzymes followed by replication ...
Jara Teresa Parrilla-Doblas   +2 more
doaj   +1 more source

Repair of oxidative DNA base damage in the host genome influences the HIV integration site sequence preference. [PDF]

open access: yesPLoS ONE, 2014
Host base excision repair (BER) proteins that repair oxidative damage enhance HIV infection. These proteins include the oxidative DNA damage glycosylases 8-oxo-guanine DNA glycosylase (OGG1) and mutY homolog (MYH) as well as DNA polymerase beta (Polβ ...
Geoffrey R Bennett   +7 more
doaj   +1 more source

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