Results 11 to 20 of about 1,469,775 (287)

The problem of omnivory: A synthesis on omnivory and DNA metabarcoding [PDF]

open access: yesMolecular Ecology, 2021
Dietary analysis using DNA metabarcoding is a powerful tool that is increasingly being used to further our knowledge of trophic interactions in highly complex food webs but is not without limitations.
Tercel, Maximillian P.T.G.   +8 more
core   +6 more sources

Influence of DNA extraction kits on freshwater fungal DNA metabarcoding [PDF]

open access: yesPeerJ, 2022
BACKGROUND: Environmental DNA (eDNA) metabarcoding is a common technique for efficient biodiversity monitoring, especially of microbes. Recently, the usefulness of aquatic eDNA in monitoring the diversity of both terrestrial and aquatic fungi has been ...
Nagano, Mariko   +3 more
core   +5 more sources

Comparative Analysis of Environmental DNA Metabarcoding and Spectro‐Fluorescence for Phytoplankton Community Assessments

open access: yesEnvironmental DNA
Quantifications of phytoplankton biomass and species composition are crucial for monitoring biodiversity and population dynamics in aquatic environments, and both direct microscopic counts and fluorescence‐based methods have been widely used for ...
Romana Salis, Lars‐Anders Hansson
doaj   +2 more sources

Validating environmental DNA metabarcoding for marine fishes in diverse ecosystems using a public aquarium

open access: yesEnvironmental DNA, 2020
Environmental DNA metabarcoding has been widely touted as a powerful tool for monitoring biodiversity in marine ecosystems. However, this method still requires thorough validation and standardization before it can be widely applied for ecological ...
Kevin C. Morey   +2 more
doaj   +2 more sources

Comparing DNA metabarcoding with light microscopy to identify eukaryotic phytoplankton in the Baltic Sea, Kattegat and Skagerrak [PDF]

open access: yesScientific Reports
Marine phytoplankton monitoring has long relied on microscopy, but DNA metabarcoding has recently emerged as a complementary approach. This study assessed the applicability of DNA metabarcoding of the 18S ribosomal RNA gene in marine monitoring and ...
Anders Torstensson   +9 more
doaj   +2 more sources

DNA metabarcoding data analysis

open access: yes, 2018
DNA metabarcoding generates huge amounts of data containing noise introduced by molecular methods. Chapter 8 “DNA metabarcoding data analysis” discusses the analytic steps and available software to curate and evaluate DNA metabarcoding data prior to ...
Pierre Taberlet   +3 more
core   +2 more sources

Dietary DNA Metabarcoding From Animal Fecal Samples. [PDF]

open access: yesCurr Protoc
Fecal DNA metabarcoding is a powerful tool for examining animal diets with unprecedented resolution, offering insights into ecological patterns shaped by trophic interactions.
McConnell RD   +6 more
europepmc   +4 more sources

From Sequences to Food Webs: DNA Metabarcoding Reshapes Fish Trophic Ecology [PDF]

open access: yesAnimals
Fish occupy pivotal trophic positions in aquatic ecosystems, mediating energy transfer and shaping community structure through their feeding interactions.
Lin Liang   +5 more
doaj   +2 more sources

The power of metabarcoding: Can we improve bioassessment and biodiversity surveys of stream macroinvertebrate communities? [PDF]

open access: yesMetabarcoding and Metagenomics, 2021
Most stream bioassessment and biodiversity surveys are currently based on morphological identification of communities. However, DNA metabarcoding is emerging as a fast and cost-effective alternative for species identification. We compared both methods in
Jarno Turunen   +5 more
doaj   +3 more sources

Evaluating the performance of DNA metabarcoding for assessment of zooplankton communities in Western Lake Superior using multiple markers [PDF]

open access: yesMetabarcoding and Metagenomics, 2021
For DNA metabarcoding to attain its potential as a community assessment tool, we need to better understand its performance versus traditional morphological identification and work to address any remaining performance gaps in incorporating DNA ...
Christy Meredith   +6 more
doaj   +3 more sources

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