A Pilot Investigation of the Hidden Communities Associated With Dryas octopetala L. (Rosaceae) in Svalbard Using DNA Metabarcoding. [PDF]
Environ Microbiol RepCarvalho-Silva M +8 more
europepmc +1 more source
Advancing Seabird Diet Studies Through Buccal Swabbing for DNA Metabarcoding. [PDF]
Ecol EvolEvans LG +4 more
europepmc +1 more source
Correction to "A Multi-Taxa Approach to Estuarine Biomonitoring: Assessing Vertebrate Biodiversity and Ecological Continuity Using Environmental DNA Metabarcoding in the Rance River (Brittany, France)". [PDF]
Ecol Evoleuropepmc +1 more source
Bioinformatic challenges for DNA metabarcoding of plants and animals [PDF]
Molecular Ecology, 2012 AbstractAlmost all empirical studies in ecology have to identify the species involved in the ecological process under examination. DNA metabarcoding, which couples the principles of DNA barcoding with next generation sequencing technology, provides an opportunity to easily produce large amounts of data on biodiversity.
Eric Coissac
exaly +3 more sources
A practical guide to DNA metabarcoding for entomological ecologists
Ecological Entomology, 2020 1. DNA metabarcoding is a cost‐effective species identification approach with great potential to assist entomological ecologists. This review presents a practical guide to help entomological ecologists design their own DNA metabarcoding studies and ...
Susan Baker +2 more
exaly +1 more source
DNA Metabarcoding for the Characterization of Terrestrial Microbiota—Pitfalls and Solutions [PDF]
Microorganisms, 2021 Soil-borne microbes are major ecological players in terrestrial environments since they cycle organic matter, channel nutrients across trophic levels and influence plant growth and health. Therefore, the identification, taxonomic characterization and determination of the ecological role of members of soil microbial communities have become major topics ...
Davide Francioli +2 more
exaly +4 more sources
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A quantitative protocol for DNA metabarcoding of springtails (Collembola)
Genome, 2016We developed a novel protocol with superior quantitative analysis results for DNA metabarcoding of Collembola, a major soil microarthropod order. Degenerate PCR primers were designed for conserved regions in the mitochondrial cytochrome c oxidase subunit I (mtCOI) and 16S ribosomal RNA (mt16S) genes based on published collembolan mitogenomes. The best
Seikoh, Saitoh +8 more
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Estimating belowground plant abundance with DNA metabarcoding
Molecular Ecology Resources, 2019AbstractMost work on plant community ecology has been performed above ground, neglecting the processes that occur in the soil. DNA metabarcoding, in which multiple species are computationally identified in bulk samples, can help to overcome the logistical limitations involved in sampling plant communities belowground.
Silvia Matesanz +10 more
openaire +3 more sources
DNA Metabarcoding: Current Applications and Challenges
Journal of Agricultural and Food ChemistryDNA metabarcoding is a versatile approach that combines high-throughput sequencing (HTS) with DNA barcoding and enables the simultaneous identification of multiple species in complex DNA samples. With the rapid development of high-throughput sequencing (HTS), DNA meta-barcoding has been widely applied in many fields.
Huilin Yuan +4 more
openaire +2 more sources