Results 81 to 90 of about 28,236 (304)
Metabarcoding of freshwater invertebrates to detect the effects of a pesticide spill [PDF]
, 2017 Biomonitoring underpins the environmental assessment of freshwater ecosystems and guides management and conservation. Current methodology for surveys of (macro)invertebrates uses coarse taxonomic identification where species-level resolution is difficult
Arribas +71 more
core +3 more sources
Automated high throughput animal DNA metabarcode classification [PDF]
, 2017 Until now, there has been difficulty assigning names to animal barcode sequences isolated directly from eDNA in a rapid, high-throughput manner, providing a measure of confidence for each assignment. To address this gap, we have compiled nearly 1 million marker gene DNA barcode sequences appropriate for classifying chordates, arthropods, and flag ...
Porter, Teresita M., Hajibabaei, Mehrdad
openaire +1 more source
Scaling up DNA metabarcoding for freshwater macrozoobenthos monitoring [PDF]
Freshwater Biology, 2018 The viability of DNA metabarcoding for assessment of freshwater macrozoobenthos has been demonstrated over the past years. It matured to a stage where it can be applied to monitoring at a large scale, keeping pace with increased high throughput sequencing (HTS) capacity.
Elbrecht, Vasco, Steinke, Dirk
openaire +1 more source
PLANTS, PEOPLE, PLANET, EarlyView.Large palynological collections have been built over decades and contain vital information. However, they are often difficult to access and use effectively. What is the point of having such collections if they are not fully utilizable? To solve this problem, we digitized the Smithsonian palynological collection using both light and confocal microscopy.
Carlos Jaramillo +37 more
wiley +1 more source
Impact of DNA purification method and primer selection on 16S rRNA gene metabarcoding on wine
OENO One, 2019 Aim: The high-throughput sequencing methods have revolutionized the study of the microbiota in different matrices including those of the grapevine production chain. DNA extraction is a crucial step in the sample processing.
Francesco Cerutti +7 more
doaj +1 more source
DNA metabarcoding assessment of Neotropical ichthyoplankton communities is marker‐dependent
Ecology and Evolution, 2023 The study of ichthyoplankton is paramount to understanding fish assemblages' reproductive dynamics. DNA metabarcoding has been applied as a rapid, cost‐effective, and accurate taxonomy tool, allowing the identification of multiple individuals ...
Daniel Fonseca Teixeira +3 more
doaj +1 more source
The Molecular Analysis of Hawaiian Bird Diets [PDF]
, 2018 The aim of this project is to utilize high-throughput molecular methods to investigate the diets of three non-native and one native Hawaiian bird species.
Scinto, Alissa C
core +1 more source
Soil microbial communities in restored and unrestored coastal dune ecosystems in California [PDF]
, 2020 Most restoration projects involving invasive plant eradication tend to focus on plant removal with little consideration given to how these invasives change soil microbial communities.
Barberán, A +4 more
core
An assessment of the genus Columbella Lamarck, 1799 (Gastropoda: Columbellidae) from eastern Atlantic [PDF]
, 2017 Three species of the neogastropod genus Columbella Lamarck, 1799 are recognised from the northeastern Atlantic and the Mediterranean. One is the common Mediterranean C.
Demaintenon, Marta J. +4 more
core +2 more sources
PLANTS, PEOPLE, PLANET, EarlyView.The jewel‐like flowers of Thismia are as rare as they are beautiful, often recorded from only a single site per species. Access to 15 populations of T. kobensis has enabled an uncommon, range‐wide assessment of morphology, genetics, and fungal partners. Our analyses showed that T.
Kenji Suetsugu +4 more
wiley +1 more source