Results 151 to 160 of about 93,119 (340)

A Murine Database of Structural Variants Identifies A Candidate Gene for a Spontaneous Murine Lymphoma Model

Advanced Science, EarlyView.
We analyzed long‐read genomic sequencing data obtained from 40 inbred mouse strains to produce a large database of structural variants. This dataset captures the major types of structural variants, which includes deletions, insertions, duplications, and inversions.
Wenlong Ren, Zhuoqing Fang, Egor Dolzhenko, Christopher T. Saunders, Zhuanfen Cheng, Victoria Popic, Gary Peltz   +6 more
wiley   +1 more source

DNA virus infections shape transposable elements activity in vitro and in vivo [PDF]

Jiang Tan, Vedran Franke, Eva Neugebauer, Justine Lagisquet, Anna Katharina Kuderna, Stephanie Wälter, Markus Landthaler, Armin Ensser, Thomas Stamminger, Thomas Gramberg, Altuna Akalin, Emanuel Wyler, Florian Full, Altuna Akalin, Emanuel Wyler, Florian Full   +15 more
openalex   +1 more source

Chromatin and siRNA pathways cooperate to maintain DNA methylation of small transposable elements in Arabidopsis [PDF]

, 2005
Robert K. Tran, Daniel Zilberman, Cecilia de Bustos, Renata Fava Ditt, Jorja G. Henikoff, Anders M. Lindroth, Jeffrey J. Delrow, Tom Boyle, Samson Kwong, Terri D. Bryson, Steven E. Jacobsen, Steven Henikoff   +11 more
openalex   +1 more source

A Statistical Mechanics Model to Decode Tissue Crosstalk During Graft Formation

Advanced Science, EarlyView.
We introduce a statistical mechanics framework to decode the genomic crosstalk governing plant grafting. By integrating evolutionary game theory with transcriptomics, we reconstruct idopNetworks (informative, dynamic, omnidirectional, and personalized networks) that map scion–rootstock interactions.
Ang Dong, Yihan Meng, Stephen Shing‐Toung Yau, Shing‐Tung Yau, Rongling Wu   +4 more
wiley   +1 more source

Supplementary Material for: Characterization and Genomic Organization of PERI, a Repetitive DNA in the Drosophila buzzatii Cluster Related to DINE-1 Transposable Elements and Highly Abundant in the Sex Chromosomes

, 2010
Kuhn G.C.S., J. S. Heslop‐Harrison
openalex   +1 more source

Comparison of Pre‐ and Postoperative Gut Microbiota Diversity in Patients With Rectal Cancer Undergoing Stoma Creation and Closure

Annals of Gastroenterological Surgery, EarlyView.
We investigated the impact of temporary stoma creation and closure on gut microbiota diversity in rectal cancer patients. 16S rRNA sequencing revealed that microbial diversity significantly decreased postoperatively in the stoma group but remained stable in non‐stoma patients.
Yusuke Suzuki, Wataru Osumi, Kohei Taniguchi, Nahoko Kato‐Kogoe, Shoichi Sakaguchi, Shota Nakamura, Yoshiro Imai, Takashi Nakano, Takaaki Ueno, Sang‐Woong Lee   +9 more
wiley   +1 more source

The prospects of using retrotransposon iPBS molecular marker to characterise the genetic diversity of Chrysochraon dispar and Stethophyma grossum (Orthoptera: Acrididae)

European Journal of Entomology
Molecular markers have become indispensable tools in contemporary ecological research, offering insights into genetic diversity and structure. These parameters are pivotal for addressing fundamental questions in landscape ecology and planning effective ...
Rūta STARKA, Paula Marta MUCENIECE, Nikole KRASŅEVSKA, Andra MIĶELSONE, Gunita DEKSNE, Dace GRAUDA   +5 more
doaj   +1 more source

Correction to: low coverage sequencing for repetitive DNA analysis in Passiflora edulis Sims: citogenomic characterization of transposable elements and satellite DNA [PDF]

, 2019
Vanessa Carvalho Cayres Pamponét, Margarete Magalhães Souza, Gonçalo Santos Silva, Fabienne Micheli, Cláusio Antônio Ferreira de Melo, Sárah Gomes de Oliveira, Eduardo Almeida Costa, Ronan Xavier Corrêa   +7 more
openalex   +1 more source

Macrophage Phenotype Detection Methodology on Textured Surfaces via Nuclear Morphology Using Machine Learning

Advanced Intelligent Discovery, EarlyView.
A novel machine learning approach classifies macrophage phenotypes with up to 98% accuracy using only nuclear morphology from DAPI‐stained images. Bypassing traditional surface markers, the method proves robust even on complex textured biomaterial surfaces. It offers a simpler, faster alternative for studying macrophage behavior in various experimental
Oleh Mezhenskyi, Kateryna Andriienkova, Tetyana Goldanova, Ezgi Antmen, Thibaut Soubrie, Nihal Engin Vrana   +5 more
wiley   +1 more source

Cytogenomic Characterization of Transposable Elements and Satellite DNA in Passiflora L. Species

Genes
The species Passiflora alata, P. cincinnata, and P. edulis have great economic value due to the use of their fruits for human consumption. In this study, we compared the repetitive genome fractions of these three species. The compositions of the repetitive DNA of these three species’ genomes were analyzed using clustering and identification of the ...
Silva, Gonçalo, Souza, Margarete, Pamponét, Vanessa, Micheli, Fabienne, Melo, Cláusio, Oliveira, Sárah, Costa, Eduardo   +6 more
openaire   +5 more sources