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Environmental RNA as a Tool for Marine Community Biodiversity Assessments. [PDF]
Sci Rep, 2022 AbstractMicroscopic organisms are often overlooked in traditional diversity assessments due to the difficulty of identifying them based on morphology. Metabarcoding is a method for rapidly identifying organisms where Environmental DNA (eDNA) is used as a template.
Giroux MS +4 more
europepmc +4 more sources
The use of environmental RNA for inferring fish spawning behavior. [PDF]
Sci RepEnvironmental DNA (eDNA) is a popular method to study species composition, community structure, and invasive species presence but this method is limited for inferring dynamic physiological activities of the identified organisms. Recently, environmental RNA (eRNA) collection and analysis has emerged as a useful tool to shed light on the functions and ...
Aminaka Y, Wong MK, Yada T, Hyodo S.
europepmc +4 more sources
Warm temperature and alkaline conditions accelerate environmental RNA degradation
Environmental DNA, 2023 Recent developments in environmental DNA (eDNA) analysis allow more rapid and extensive biomonitoring than traditional capture‐based surveys do. However, detection of eDNA not derived from living organisms may lead to false‐positive inferences of species
Toshiaki Jo +3 more
doaj +2 more sources
Environmental fate of double-stranded RNA in agricultural soils.
PLoS ONE, 2014 A laboratory soil degradation study was conducted to determine the biodegradation potential of a DvSnf7 dsRNA transcript derived from a Monsanto genetically modified (GM) maize product that confers resistance to corn rootworm (CRW; Diabrotica spp.). This
Samuel Dubelman +7 more
doaj +3 more sources
Frontiers in Marine Science, 2019 Environmental DNA is increasingly being used in marine invasive species surveillance despite the inability to discriminate between contemporary intracellular (i.e., living) and extracellularly persistent (i.e., legacy) DNA fragments. Environmental RNA is
Ulla von Ammon +11 more
doaj +3 more sources
Release and degradation of dissolved environmental RNAs from zebrafish cells
RNA BiologyThe sources and degradation profiles of dissolved environmental RNAs from fish in water remain unknown. In this study, laboratory experiments and mathematical modelling were conducted to investigate the permeability of RNA extracted from zebrafish cells ...
Zhongneng Xu, Shuichi Asakawa
doaj +3 more sources
Proteomic Changes in Response to Colorless nonripening Mutation during Tomato Fruit Ripening
Plants, 2022 SlSPL-CNR is a multifunctional transcription factor gene that plays important roles in regulating tomato fruit ripening. However, the molecular basis of SlSPL-CNR in the regulatory networks is not exactly clear.
Ting Zhou +5 more
doaj +1 more source
Mobile Flowering Locus T RNA – Biological Relevance and Biotechnological Potential
Frontiers in Plant Science, 2022 Many systemically mobile mRNAs have been revealed in phloem. However, very few of them have been found to be of clear signaling functions. One of such rare examples is the mobile Flowering locus T (FT) mRNA despite the continuous debate about its ...
Zhiming Yu +7 more
doaj +1 more source
Characterization of genes associated with TGA7 during the floral transition
BMC Plant Biology, 2021 Background The TGACG-binding (TGA) family has 10 members that play vital roles in Arabidopsis thaliana defense responses and development. However, their involvement in controlling flowering time remains largely unknown and requires further investigation.
Xiaorui Xu +8 more
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C-terminal domain phosphatase-like 1 (CPL1) is involved in floral transition in Arabidopsis
BMC Genomics, 2021 Background RNA polymerase II plays critical roles in transcription in eukaryotic organisms. C-terminal Domain Phosphatase-like 1 (CPL1) regulates the phosphorylation state of the C-terminal domain of RNA polymerase II subunit B1, which is critical in ...
Chen Yuan +6 more
doaj +1 more source