Development of EST-SSR markers based on transcriptome and its validation in ginger (Zingiber officinale Rosc.) [PDF]
PLoS ONE, 2021 Ginger (Zingiber officinale Rosc.) is an economically important and valuable spice crop around the world. It is used as food, spice, condiment, and medicine.
Venugopal Vidya +5 more
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Tolerance evaluation and genetic relationship analysis among some economically important chestnut cultivars in Türkiye using drought-associated SSR and EST-SSR markers [PDF]
Scientific Reports, 2023 The aim of this study was to evaluate drought tolerance and genetic relationships among some important chestnut cultivars for Türkiye by using drought-related genomic simple sequence repeat (SSR) markers and genic expressed sequence tag-simple sequence ...
Didem Kara, Emine Orhan
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Analysis of EST-SSR characteristics of prickly ash transcriptome and development of molecular markers [PDF]
Scientific ReportsTo explore the genetic diversity and relationships among prickly ash germplasm resources in China, the number, distribution, and repeat types of simple sequence repeats (EST-SSR) loci were analyzed using the MISA software system based on the ...
Jiamin Liu +10 more
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Journal of Integrative Agriculture, 2012 EST-derived SSR marker has been developed in many species, but few methods of high efficiency have been reported for the exploitation of EST-SSR markers. Thus, a high efficiency method for mining millions of redundant EST data is needed.
Xue ZHAO +4 more
exaly +3 more sources
De novo transcriptomic analysis and identification of EST-SSR markers in Stephanandra incisa [PDF]
Scientific Reports, 2021 Stephanandra incisa is a wild-type shrub with beautiful leaves and white flowers and is commonly used as a garden decoration accessory. However, the limited availability of genomic data of S. incisa has restricted its breeding process.
Cuiping Zhang +5 more
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Development of EST-SSR markers based on transcriptome for genetic analysis in Radix Ardisia [PDF]
PeerJRadix Ardisia is a commonly used medicine for the Miao nationality distributed over Guizhou and used to treat laryngeal diseases. The medicinal materials of the Radix Ardisia come from various sources, including Bailiangjin (Ardisia crispa (Thunb.) A. DC.
Deqiang Ren +3 more
doaj +3 more sources
Genetic Diversity of Blueberry Genotypes Estimated by Antioxidant Properties and Molecular Markers
Antioxidants, 2021 Blueberries (Vaccinium spp.) have gained much attention worldwide because of their potential health benefits and economic importance. Genetic diversity was estimated in blueberry hybrids, wild clones and cultivars by their antioxidant efficacy, total ...
Dhrumit S. Bhatt, Samir C. Debnath
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RNA-Seq SSRs of Moth Orchid and Screening for Molecular Markers across Genus Phalaenopsis (Orchidaceae). [PDF]
PLoS ONE, 2015 The moth orchid (Phalaenopsis species) is an ornamental crop that is highly commercialized worldwide. Over 30,000 cultivars of moth orchids have been registered at the Royal Horticultural Society (RHS).
Chi-Chu Tsai +6 more
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Frontiers in Plant Science, 2022 Abelmoschus esculentus is a medicinal and edible plant that contains large amounts of active ingredients, including anthocyanins, polysaccharides, flavonoids, and terpenoids.
Xia An +4 more
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Development and Validation of Gene-Based SSR Markers in the Genus Mesembryanthemum
Scientifica, 2023 Bioinformatics tools have been employed for the direct development of gene-based simple sequence repeat (SSR) markers. Through the analysis of 28,056 Mesembryanthemum expressed sequence tag (EST) sequences, a total of 5,851 ESTs containing SSRs were ...
Muhanad Akash +5 more
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