Genomicus: five genome browsers for comparative genomics in eukaryota [PDF]
Nucleic Acids Research, 2012 Genomicus (http://www.dyogen.ens.fr/genomicus/) is a database and an online tool that allows easy comparative genomic visualization in >150 eukaryote genomes. It provides a way to explore spatial information related to gene organization within and between genomes and temporal relationships related to gene and genome evolution.
Louis A, Muffato M, Roest Crollius H
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Parasitism in Eukaryota - Reconstruction of Ancestral and Unavailable Extant States [PDF]
Biodiversity Information Science and Standards, 2018 Parasitism can be defined as an interaction between species in which one of the interaction partners, the parasite, lives in or on the other, the host. The parasite draws food from its host and harms it in the process. According to some estimates, over 40% of all eukaryotes are parasites.
Lydia Buntrock +2 more
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Comparative Proteomic Characterization of Protein Disorder distribution across Eukaryota
, 2012 An analysis of the complexity of proteomes using SLiMPred, a method to detect short linear motifs in protein sequences.
Mooney, Catherine +1 more
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The Journal of Parasitology, 1996 The phylogenetic position of the phylum Haplosporidia was investigated with the complete small subunit rRNA gene sequences from 5 species in the phylum: Haplosporidium nelsoni and Haplosporidium costale, parasites of the eastern oyster Crassostrea virginica; Haplosporidium louisiana, a parasite of the mudcrab Panopeus herbstii; Minchinia teredinis, a ...
B S, Flores, M E, Siddall, E M, Burreson
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Tracing the paths of modular evolution by quantifying rearrangement events of protein domains [PDF]
BMC Ecology and EvolutionBackground Protein evolution is central to molecular adaptation and largely characterized by modular rearrangements of domains, the evolutionary and structural building blocks of proteins.
Abdulbaki Coban +2 more
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Diploid chromosome-level genome assembly and annotation for Lycorma delicatula [PDF]
Scientific DataThe spotted lanternfly (Lycorma delicatula) is a planthopper species (Hemiptera: Fulgoridae) native to China but invasive in South Korea, Japan, and the United States where it is a significant threat to agriculture. Genomic resources are critical to both
Anthony A. Snead +4 more
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Behavior of replication origins in Eukaryota – spatio-temporal dynamics of licensing and firing [PDF]
Cell Cycle, 2015 Although every organism shares some common features of replication, this process varies greatly among eukaryotic species. Current data show that mathematical models of the organization of origins based on possibility theory may be applied (and remain accurate) in every model organism i.e. from yeast to humans.
Marcelina W, Musiałek, Dorota, Rybaczek
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The All-Data-Based Evolutionary Hypothesis of Ciliated Protists with a Revised Classification of the Phylum Ciliophora (Eukaryota, Alveolata) [PDF]
, 2016 This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the ...
A Baroin-Tourancheau +109 more
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EukProt enables reproducible Eukaryota-wide protein sequence analyses
Peer Community in Genomics, 2022 Gavin M. Douglas
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Proteins distinguish three structurally distinct ribosomes in eukaryota [PDF]
Acta Crystallographica Section A Foundations of Crystallography, 2013 William L. Duax +2 more
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