Results 21 to 30 of about 52,997 (194)

Genomicus: five genome browsers for comparative genomics in eukaryota [PDF]

open access: yesNucleic Acids Research, 2012
Genomicus (http://www.dyogen.ens.fr/genomicus/) is a database and an online tool that allows easy comparative genomic visualization in >150 eukaryote genomes. It provides a way to explore spatial information related to gene organization within and between genomes and temporal relationships related to gene and genome evolution.
Louis A, Muffato M, Roest Crollius H
openaire   +2 more sources

Fungal genomes tell a story of ecological adaptations [PDF]

open access: yes, 2014
One genome enables a fungus to have various lifestyles and strategies depending on environmental conditions and in the presence of specific counterparts.
Muszewska, Anna
core   +3 more sources

Finite Dimension: A Mathematical Tool to Analise Glycans [PDF]

open access: yes, 2018
There is a need to develop widely applicable tools to understand glycan organization, diversity and structure. We present a graph-theoretical study of a large sample of glycans in terms of finite dimension, a new metric which is an adaptation to finite ...
Alonso, Juan Manuel   +4 more
core   +2 more sources

A new census of protein tandem repeats and their relationship with intrinsic disorder [PDF]

open access: yes, 2020
Protein tandem repeats (TRs) are often associated with immunity-related functions and diseases. Since that last census of protein TRs in 1999, the number of curated proteins increased more than seven-fold and new TR prediction methods were published. TRs
Anisimova, Maria   +4 more
core   +1 more source

Genes encoding intrinsic disorder in Eukaryota have high GC content [PDF]

open access: yesIntrinsically Disordered Proteins, 2016
We analyze a correlation between the GC content in genes of 12 eukaryotic species and the level of intrinsic disorder in their corresponding proteins. Comprehensive computational analysis has revealed that the disordered regions in eukaryotes are encoded by the GC-enriched gene regions and that this enrichment is correlated with the amount of disorder ...
Peng, Zhenling   +2 more
openaire   +3 more sources

Culturing the Human Oral Microbiota, Updating Methodologies and Cultivation Techniques

open access: yesMicroorganisms, 2023
Recent years have been marked by a paradigm shift in the study of the human microbiota, with a re-emergence of culture-dependent approaches. Numerous studies have been devoted to the human microbiota, while studies on the oral microbiota still remain ...
Saber Khelaifia   +5 more
doaj   +1 more source

The male and female gonad transcriptome of the edible sea urchin, Paracentrotus lividus: Identification of sex-related and lipid biosynthesis genes

open access: yesAquaculture Reports, 2022
Paracentrotus lividus is the most abundant, geographically distributed, and desirable echinoid species in Europe. Although economically important, this species has scarce genomic resources available.
André M. Machado   +5 more
doaj   +1 more source

Molecular Recognition Features (MoRFs) in three domains of life [PDF]

open access: yes, 2015
Intrinsically disordered proteins and protein regions offer numerous advantages in the context of protein–protein interactions when compared to the structured proteins and domains.
Dunker, A. Keith   +3 more
core   +1 more source

Effects of Candidatus Liberibacter asiaticus infection on metagenome of Diaphorina citri gut endosymbiont

open access: yesScientific Data, 2023
Asian citrus psyllid (Diaphorina citri, D. citri) is the important vector of “Candidatus Liberibacter asiaticus” (CLas), associated with Huanglongbing, the most devastating citrus disease worldwide. CLas can affect endosymbiont abundance of D.
Qi Pan   +13 more
doaj   +1 more source

An extra dimension in protein tagging by quantifying universal proteotypic peptides using targeted proteomics [PDF]

open access: yes, 2016
The use of protein tagging to facilitate detailed characterization of target proteins has not only revolutionized cell biology, but also enabled biochemical analysis through efficient recovery of the protein complexes wherein the tagged proteins reside ...
De Sutter, Delphine   +9 more
core   +2 more sources

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