Results 21 to 30 of about 50,954 (215)

A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the Eukaryota [PDF]

RNA, 2005
The ongoing characterization of novel species creates the need for a molecular marker which can be used for species- and, simultaneously, for mega-systematics. Recently, the use of the internal transcribed spacer 2 (ITS2) sequence was suggested, as it shows a high divergence in sequence with an assumed conservation in structure.
Daniel Gerlach, Matthias Wolf, Jörg Schultz, Stefanie Maisel, Tobias Müller   +4 more
openaire   +4 more sources

Cytoskeletal organization, phylogenetic affinities and systematics in the contentious taxon Excavata (Eukaryota) [PDF]

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2003
An overview of the controversial proposal for the major eukaryote taxon "Excavata" is presented. Excavata is predicted to include at least ten distinct groups: jakobids, Malawimonas, Trimastix, Carpediemonas, retortamonads, diplomonads, Heterolobosea, oxymonads, parabasalids and Euglenozoa.
Alastair G. B. Simpson
openaire   +4 more sources

Behavior of replication origins in Eukaryota – spatio-temporal dynamics of licensing and firing [PDF]

Cell Cycle, 2015
Although every organism shares some common features of replication, this process varies greatly among eukaryotic species. Current data show that mathematical models of the organization of origins based on possibility theory may be applied (and remain accurate) in every model organism i.e. from yeast to humans.
Dorota Rybaczek, Marcelina W. Musiałek
openaire   +4 more sources

Quantifying Soil Microbiome Abundance by Metatranscriptomics and Complementary Molecular Techniques-Cross-Validation and Perspectives. [PDF]

Mol Ecol Resour
ABSTRACT Linking meta‐omics and biogeochemistry approaches in soils has remained challenging. This study evaluates the use of an internal RNA extraction standard and its potential for making quantitative estimates of a given microbial community size (biomass) in soil metatranscriptomics. We evaluate commonly used laboratory protocols for RNA processing,
Dahl MB, Brachmann S, Söllinger A, Schnell M, Ahlers L, Wutkowska M, Hoff KJ, Nath N, Groß V, Wang H, Weil M, Piecha M, Schaffer M, Jensen C, Kuss AW, Gall C, Wimmer E, Pribasnig T, Tveit AT, Sigurdsson BD, Schleper C, Richter A, Urich T.   +22 more
europepmc   +2 more sources

SANTA domain: a novel conserved protein module in Eukaryota with potential involvement in chromatin regulation [PDF]

Bioinformatics, 2006
Abstract Since packaging of DNA in the chromatin structure restricts the accessibility for regulatory factors, chromatin remodeling is required to facilitate nuclear processes such as gene transcription, replication, and genome recombination.
Dapeng Zhang, Christopher J. Martyniuk, Vance L. Trudeau   +2 more
openaire   +5 more sources

Advances In The Understanding of The Commensal Eukaryota And Viruses Of The Herbivore Gut [PDF]

, 2021
Anaerobic fungi and ciliate protozoa represent up to half of the herbivore gut microbial biomass. They are generally recognized as mutualistic symbionts in ruminant animals since they produce a wide range of cellulolytic and amylolytic enzymes and play a key role in feed degradation for the host. This is particularly true of anaerobic fungi, which have
openaire   +4 more sources

The All-Data-Based Evolutionary Hypothesis of Ciliated Protists with a Revised Classification of the Phylum Ciliophora (Eukaryota, Alveolata) [PDF]

, 2016
This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the ...
A Baroin-Tourancheau, A Fleury, A Kahl, A Stamatakis, AW Jankowski, B Hammerschmidt, BA Dehority, BJ Wicklow, BK Diggles, C Shao, C Shao, C Shao, CA Grolière, CF Bardele, CF Bardele, D Williams, DC Hoffman, DH Lynn, DH Lynn, DL Lipscomb, DL Lipscomb, E Gentekaki, EA Hewitt, F Abascal, F Gao, F Gao, F Gao, F Gao, F Ronquist, FM Affa’a, H Berger, H Shimodaira, H Shimodaira, H Wang, H Xu, ID da Silva Neto, J Gong, J Grain, J Huang, J Jiang, J Li, JM Feng, KL Kivimaki, L Li, L Li, L Li, LR Utz, LW Parfrey, M Dunthorn, M Dunthorn, M Kathol, M Miao, M Miao, M Miao, M Miao, MC Strüder-Kypke, MC Strüder-Kypke, MC Strüder-Kypke, MD Johnson, MK Shin, O Penn, OL Snoeyenbos-West, P Sun, P Sun, P Sun, P Sun, P Vdacny, P Vd’ačný, PC Bradbury, Pd Puytorac, Q Zhang, Q Zhang, Q Zhang, Q Zhang, S Agatha, S Agatha, S Gao, SL Schmidt, SM Adl, W Foissner, W Foissner, W Foissner, W Foissner, W Foissner, W Foissner, W Foissner, W Foissner, W Liu, W Miao, W Miao, W Orsi, W Song, WA Bourland, WW Liu, X Chen, X Chen, X Fan, X Fan, X Fan, X Pan, Y Gong, Y Gong, Z Fokam, Z Yi, Z Yi, Z Yi, Z Yi, Z Yi, Z Zhan, Z Zhan   +109 more
core   +3 more sources

Phylogeny of the Haplosporidia (Eukaryota: Alveolata) Based on Small Subunit Ribosomal RNA Gene Sequence

The Journal of Parasitology, 1996
The phylogenetic position of the phylum Haplosporidia was investigated with the complete small subunit rRNA gene sequences from 5 species in the phylum: Haplosporidium nelsoni and Haplosporidium costale, parasites of the eastern oyster Crassostrea virginica; Haplosporidium louisiana, a parasite of the mudcrab Panopeus herbstii; Minchinia teredinis, a ...
Eugene M. Burreson, Mark E. Siddall, Brenda Sandy Flores   +2 more
openaire   +5 more sources

Comparative Proteomic Characterization of Protein Disorder distribution across Eukaryota [PDF]

, 2012
An analysis of the complexity of proteomes using SLiMPred, a method to detect short linear motifs in protein sequences.
Mooney Catherine, Holton Denis Shields Therese   +1 more
openaire   +2 more sources

EukProt enables reproducible Eukaryota-wide protein sequence analyses

Peer Community in Genomics, 2022
Gavin M. Douglas
openaire   +3 more sources