Results 81 to 90 of about 557,186 (345)

Annotating proteins with generalized functional linkages [PDF]

open access: yesProceedings of the National Academy of Sciences, 2008
As genome sequencing outstrips the rate of high-quality, low-throughput biochemical and genetic experimentation, accurate annotation of protein function becomes a bottleneck in the progress of the biomolecular sciences. Most gene products are now annotated by homology, in which an experimentally determined function is applied to a similar ...
Richard, Llewellyn, David S, Eisenberg
openaire   +2 more sources

circGPA: circRNA functional annotation based on probability-generating functions

open access: yesBMC Bioinformatics, 2022
AbstractRecent research has already shown that circular RNAs (circRNAs) are functional in gene expression regulation and potentially related to diseases. Due to their stability, circRNAs can also be used as biomarkers for diagnosis. However, the function of most circRNAs remains unknown, and it is expensive and time-consuming to discover it through ...
Petr Ryšavý   +2 more
openaire   +3 more sources

Reciprocal control of viral infection and phosphoinositide dynamics

open access: yesFEBS Letters, EarlyView.
Phosphoinositides, although scarce, regulate key cellular processes, including membrane dynamics and signaling. Viruses exploit these lipids to support their entry, replication, assembly, and egress. The central role of phosphoinositides in infection highlights phosphoinositide metabolism as a promising antiviral target.
Marie Déborah Bancilhon, Bruno Mesmin
wiley   +1 more source

Functionally Annotating Regulatory Elements in the Equine Genome Using Histone Mark ChIP-Seq. [PDF]

open access: yes, 2019
One of the primary aims of the Functional Annotation of ANimal Genomes (FAANG) initiative is to characterize tissue-specific regulation within animal genomes.
Bellone, Rebecca R   +9 more
core   +2 more sources

PANNZER2: a rapid functional annotation web server [PDF]

open access: yesNucleic Acids Research, 2018
The unprecedented growth of high-throughput sequencing has led to an ever-widening annotation gap in protein databases. While computational prediction methods are available to make up the shortfall, a majority of public web servers are hindered by practical limitations and poor performance. Here, we introduce PANNZER2 (Protein ANNotation with Z-scoRE),
Medlar Alan, Holm Liisa, Törönen Petri
openaire   +3 more sources

An intracellular transporter mitigates the CO2‐induced decline in iron content in Arabidopsis shoots

open access: yesFEBS Letters, EarlyView.
This study identifies a gene encoding a transmembrane protein, MIC, which contributes to the reduction of shoot Fe content observed in plants under elevated CO2. MIC is a putative Fe transporter localized to the Golgi and endosomal compartments. Its post‐translational regulation in roots may represent a potential target for improving plant nutrition ...
Timothy Mozzanino   +7 more
wiley   +1 more source

Best Practices for Comprehensive Annotation of Neuropeptides of Gryllus bimaculatus

open access: yesInsects, 2023
Genome annotation is critically important data that can support research. Draft genome annotations cover representative genes; however, they often do not include genes that are expressed only in limited tissues and stages, or genes with low expression ...
Takako Mochizuki   +8 more
doaj   +1 more source

MycoWiki: Functional annotation of the minimal model organism Mycoplasma pneumoniae [PDF]

open access: gold, 2022
Christoph Elfmann   +6 more
openalex   +1 more source

On gene ontology and function annotation [PDF]

open access: yesBioinformation, 2006
The effort of function annotation does not merely involve associating a gene with some structured vocabulary that describes action. Rather the details of the actions, the components of the actions, the larger context of the actions are important issues that are of direct relevance, because they help understand the biological system to which the gene ...
openaire   +2 more sources

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