ML-ExonCNV: a robust XGBoost multi-expert ensemble framework for rare exon CNV detection in whole-exome sequencing data. [PDF]
Yang SH +6 more
europepmc +1 more source
A Heterozygous Variant in the GABBR2 Gene in a Girl With Clinical Classic Rett Syndrome
A heterozygous de novo GABBR2 variant was identified in a girl with clinical classical Rett syndrome. Comparison with previously reported cases suggests that GABBR2 variants should be considered in the genetic evaluation of individuals with MECP2‐negative Rett syndrome.
Jenny Klintenstedt +3 more
wiley +1 more source
MitoGEx: An Integrated Platform for Streamlined Human Mitochondrial Genome Analysis. [PDF]
Jeenkeawpiam K +5 more
europepmc +1 more source
Identification of Variants in Two Families With Congenital Cataract by Whole Exome Sequencing
We describe likely pathogenic missense variants causing congenital cataract and investigate these variants using high‐throughput gene sequencing, Sanger sequencing, bioinformatics, and computational biology tools. Our findings provide novel insights into the molecular diagnosis of congenital cataract and have important implications for genetic ...
Yazhou Huang +8 more
wiley +1 more source
Likelihood-based optimization enables accurate copy number estimation for paralogous genes using exome data. [PDF]
Byun SY, Bansal V.
europepmc +1 more source
ABSTRACT Toxigenic Corynebacterium ulcerans, a zoonotic pathogen, was isolated repeatedly from a cat in an in‐house group in Japan. Although the cat was cured once by antibiotic treatment, clonal isolates of the original pathogenic strain were recovered repeatedly during a 2‐year course.
Ryoko Jikihara +8 more
wiley +1 more source
Millennial clonal persistence and transposable element-biased somatic mutations in an herbaceous plant (Typha latifolia). [PDF]
Zhao C +5 more
europepmc +1 more source
Chronic cigarette smoke extract exposure promoted genomic and phenotypic reprogramming in established lung cancer cells. Clonogenicity, migration, and tumor growth increased, accompanied by changes consistent with partial epithelial–mesenchymal transition. Transcriptomic analysis and whole‐genome sequencing revealed activation of inflammatory signaling,
Hyun Soo Kim +11 more
wiley +1 more source
Germline Variant Call Accuracy in Whole Genome Sequence Data from Canine Formalin-Fixed Paraffin-Embedded Tissue Samples. [PDF]
Jagannathan V, Leeb T.
europepmc +1 more source
This study aimed to determine whether personalized selection of effective drugs for SMARCB1/INI1‐deficient tumors is feasible using in vitro drug sensitivity profiling. Drug sensitivity was assessed using a short‐term collagen gel–embedded three‐dimensional drug sensitivity test (3D‐DST) in tumors derived from SMARCB1/INI1‐deficient tumor cell line ...
Hiroaki Goto +12 more
wiley +1 more source

