The repton model of gel electrophoresis [PDF]
Physica A 244, 25 (1997), 1996We discuss the repton model of agarose gel electrophoresis of DNA. We review previous results, both analytic and numerical, as well as presenting a new numerical algorithm for the efficient simulation of the model, and suggesting a new approach to the model's analytic solution.
Barkema+17 more
arxiv +7 more sources
Band-collision gel electrophoresis [PDF]
Nature Communications, 2019Electrophoretic mobility shift assays are widely used in gel electrophoresis to study binding interactions between different molecular species, but these assays access only a subset of reaction possibilities.
Dimitri A. Bikos, Thomas G. Mason
doaj +6 more sources
Transient Gel Electrophoresis of a Spherical Colloidal Particle [PDF]
Gels, 2023The general theory is developed for the time-dependent transient electrophoresis of a weakly charged spherical colloidal particle with an electrical double layer of arbitrary thickness in an uncharged or charged polymer gel medium.
Hiroyuki Ohshima
doaj +2 more sources
Comparison of non-electrophoresis grade with electrophoresis grade BIS in NIPAM polymer gel preparation [PDF]
BioImpacts, 2015Introduction: The main objective of this study was to investigate the possibility of replacing electrophoresis cross-linker with non-electrophoresis N, N′-methylenebisacrylamide (BIS) in N-isopropyl acrylamide (NIPAM) polymer gel and its possible effect
Roghaye Khodadadi+4 more
doaj +6 more sources
Power and limitations of electrophoretic separations in proteomics strategies [PDF]
Mass Spectrometry Reviews 28, 5 (2009) 816-43, 2009Proteomics can be defined as the large-scale analysis of proteins. Due to the complexity of biological systems, it is required to concatenate various separation techniques prior to mass spectrometry. These techniques, dealing with proteins or peptides, can rely on chromatography or electrophoresis.
Aebersold+225 more
arxiv +5 more sources
Gel versus capillary electrophoresis genotyping for categorizing treatment outcomes in two anti-malarial trials in Uganda [PDF]
Malaria Journal, 2010Background Molecular genotyping is performed in anti-malarial trials to determine whether recurrent parasitaemia after therapy represents a recrudescence (treatment failure) or new infection.
Hubbard Alan E+4 more
doaj +4 more sources
A new bond fluctuation method for a polymer undergoing gel electrophoresis [PDF]
, 1998We present a new computational methodology for the investigation of gel electrophoresis of polyelectrolytes. We have developed the method initially to incorporate sliding motion of tight parts of a polymer pulled by an electric field into the bond fluctuation method (BFM).
B. H. Zimm+18 more
arxiv +3 more sources
Abstract Gel electrophoresis is discussed and it is shown that this medium is still in the developmental stage for the resolution of serum proteins. It is the procedure of choice for the analysis of hemoglobins.
Samuel Raymond, Masumi Nakamichi
openalex +3 more sources
Two-dimensional gel electrophoresis in proteomics: A tutorial [PDF]
Journal of Proteomics 74, 10 (2011) 1829-41, 2011Two-dimensional electrophoresis of proteins has preceded, and accompanied, the birth of proteomics. Although it is no longer the only experimental scheme used in modern proteomics, it still has distinct features and advantages. The purpose of this tutorial paper is to guide the reader through the history of the field, then through the main steps of the
##Righetti+108 more
arxiv +5 more sources
Improved proteomic analysis of nuclear proteins, as exemplified by the comparison of two myeloïd cell lines nuclear proteomes [PDF]
Journal of Proteomics (2012) epub ahead of print, 2012One of the challenges of the proteomic analysis by 2D-gel is to visualize the low abundance proteins, particularly those localized in organelles. An additional problem with nuclear proteins lies in their strong interaction with nuclear acids. Several experimental procedures have been tested to increase, in the nuclear extract, the ratio of nuclear ...
Chevallet, Mireille+5 more
arxiv +5 more sources