Results 171 to 180 of about 401,494 (259)

The battle for user-friendly bioinformatics

Frontiers in Genetics, 2013
David Roy Smith
doaj   +1 more source

DeGeCI 1.1: a web platform for gene annotation of mitochondrial genomes. [PDF]

Bioinform Adv
Fiedler L, Bernt M, Middendorf M.
europepmc   +1 more source

Comment on 'Hayai-Annotation Plants: an ultrafast and comprehensive functional gene annotation system in plants': the importance of taking the GO graph structure into account. [PDF]

Bioinformatics, 2021
Van Bel M, Vandepoele K.
europepmc   +1 more source

Raman‐based label‐free microscopic analysis of the pancreas in living zebrafish larvae

FEBS Open Bio, EarlyView.
Forward stimulated Raman scattering (F‐SRS) and epi coherent anti‐Stokes Raman scattering (E‐CARS) allow label‐free discrimination of distinct subcellular structures in the pancreas of living zebrafish larvae. Given the straightforward applicability, we anticipate broad implementation of Raman microscopy in other organs and across various biomedical ...
Noura Faraj, Eline M. F. de Lange, Klaas A. Sjollema, Ben N. G. Giepmans   +3 more
wiley   +1 more source

PIPETS: a statistically informed, gene-annotation agnostic analysis method to study bacterial termination using 3'-end sequencing. [PDF]

BMC Bioinformatics
Furumo Q, Meyer MM.
europepmc   +1 more source

Single‐molecule DNA flow‐stretch assays for high‐throughput DNA–protein interaction studies

FEBS Open Bio, EarlyView.
We describe an optimised single‐molecule DNA flow‐stretch assay that visualises DNA–protein interactions in real time. Linear DNA fragments are tethered to a surface and stretched by buffer flow for fluorescence imaging. Using λ and φX174 DNA, this protocol enhances reproducibility and accessibility, providing a versatile approach for studying diverse ...
Ayush Kumar Ganguli, Mohammad Nour Alsamsam, Ugnė Bagdonaitė, Van Truc Vu, Chun‐Jen Huang, Polina Kuzhir, Mindaugas Zaremba, Aurimas Kopūstas, Marijonas Tutkus   +8 more
wiley   +1 more source

Highly contiguous genome assembly and gene annotation of the short-finned eel (Anguilla bicolor pacifica). [PDF]

Sci Data
Choi H, Nam J, Yang S, Eyun SI.
europepmc   +1 more source

Adaptive Immune Receptor Repertoire (AIRR) Community Guide to TR and IG Gene Annotation.

Methods Mol Biol, 2022
Babrak L, Marquez S, Busse CE, Lees WD, Miho E, Ohlin M, Rosenfeld AM, Stervbo U, Watson CT, Schramm CA, AIRR Community.   +10 more
europepmc   +1 more source

Revised Transcriptome-Based Gene Annotation for Aspergillus flavus Strain NRRL 3357. [PDF]

Microbiol Resour Announc, 2020
Hatmaker EA, Zhou X, Mead ME, Moon H, Yu JH, Rokas A.   +5 more
europepmc   +1 more source

Blood‐based proteomic profiling reveals context‐dependent changes in BCL2‐associated signaling during taxane therapy in breast cancer patients

FEBS Open Bio, EarlyView.
Chemotherapy side effects significantly impact cancer survivors' quality of life. Using protein levels in blood samples from breast cancer patients before and after 12 weeks of taxane treatment, we detected treatment‐dependent changes in calcium signaling and aging pathways associated with cancer recurrence.
Saira Munshani, Eiman Y. Ibrahim, Rozalyn L. Rodwin, Leah M. Ferrucci, Kim Blenman, Maryam Lustberg, Barbara E. Ehrlich   +6 more
wiley   +1 more source