Results 51 to 60 of about 1,986,261 (302)

RRHGE: A Novel Approach to Classify the Estrogen Receptor Based Breast Cancer Subtypes

open access: yesThe Scientific World Journal, 2014
Background. Breast cancer is the most common type of cancer among females with a high mortality rate. It is essential to classify the estrogen receptor based breast cancer subtypes into correct subclasses, so that the right treatments can be applied to ...
Ashish Saini, Jingyu Hou, Wanlei Zhou
doaj   +1 more source

An unsupervised text mining method for relation extraction from biomedical literature. [PDF]

open access: yesPLoS ONE, 2014
The wealth of interaction information provided in biomedical articles motivated the implementation of text mining approaches to automatically extract biomedical relations.
Changqin Quan, Meng Wang, Fuji Ren
doaj   +1 more source

A systematic evaluation of methods for tailoring genome-scale metabolic models

open access: yesCell Systems, 2017
Genome-scale models of metabolism can illuminate the molecular basis of cell phenotypes. Since many enzymes are only active in specific cell types, several algorithms use omics data to construct cell line- and tissue-specific metabolic models from genome-
S. Opdam   +5 more
semanticscholar   +1 more source

Inferring synteny between genome assemblies: a systematic evaluation

open access: yesBMC Bioinformatics, 2017
Genome assemblies across all domains of life are being produced routinely. Initial analysis of a new genome usually includes annotation and comparative genomics.
Dang Liu, Martin Hunt, Isheng. J. Tsai
semanticscholar   +1 more source

Ovarian Sex Cord Stromal Tumors in Children and Adolescents—The European Standard Clinical Practice Recommendations

open access: yesPediatric Blood &Cancer, EarlyView.
ABSTRACT As part of the European Cooperative Study Group for Paediatric Rare Tumours initiative, we developed standard clinical practice guidelines for ovarian sex cord stromal tumors, based on comprehensive national and international cohort analyses, literature review, and a final expert consensus conference.
Dominik T. Schneider   +15 more
wiley   +1 more source

Whole genome sequencing-based classification of human-related Haemophilus species and detection of antimicrobial resistance genes

open access: yesGenome Medicine, 2022
Background Bacteria belonging to the genus Haemophilus cause a wide range of diseases in humans. Recently, H. influenzae was classified by the WHO as priority pathogen due to the wide spread of ampicillin resistant strains. However, other Haemophilus spp.
Margo Diricks   +9 more
doaj   +1 more source

Occurrence of Extramedullary Relapses in Pediatric Acute Lymphoblastic Leukemia After Treatment With Blinatumomab

open access: yesPediatric Blood &Cancer, EarlyView.
ABSTRACT We report a retrospective single‐center analysis of pediatric patients with relapsed or refractory B‐cell precursor acute lymphoblastic leukemia focusing on relapses outside of the typical locations, bone marrow, central nervous system, or testes.
Johanna Kunz   +7 more
wiley   +1 more source

gdGSE: An algorithm to evaluate pathway enrichment by discretizing gene expression values

open access: yesComputational and Structural Biotechnology Journal
We proposed gdGSE, a novel computational framework for gene set enrichment analysis. Unlike conventional methods that rely on continuous gene expression values, gdGSE employs discretized gene expression profiles to assess pathway activity. This approach effectively mitigates discrepancies caused by data distributions.
Jiangti Luo   +5 more
openaire   +3 more sources

Infant Embryonal CNS Tumors: Molecular Insights and Treatment Considerations for Contemporary Pediatric Neuro‐Oncology

open access: yesPediatric Blood &Cancer, EarlyView.
ABSTRACT Background Embryonal tumors comprise the majority of malignant central nervous system (CNS) neoplasms diagnosed in children under 3 years of age. Compared with their counterparts in older children, these tumors exhibit distinct molecular biology and a more aggressive clinical phenotype, while their management is complicated by the heightened ...
Sudarshawn Damodharan   +3 more
wiley   +1 more source

CpG islands or CpG clusters: how to identify functional GC-rich regions in a genome?

open access: yesBMC Bioinformatics, 2009
Background CpG islands (CGIs), clusters of CpG dinucleotides in GC-rich regions, are often located in the 5' end of genes and considered gene markers. Hackenberg et al.
Han Leng, Zhao Zhongming
doaj   +1 more source

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