Results 41 to 50 of about 463,290 (301)
Integration of molecular network data reconstructs Gene Ontology. [PDF]
, 2014 Motivation: Recently, a shift was made from using Gene Ontology (GO) to evaluate molecular network data to using these data to construct and evaluate GO. Dutkowski et al. provide the first evidence that a large part of GO can be reconstructed solely from
Gligorijević, V, Janjić, V, Pržulj, N
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BMC Genomics, 2010 Background There is increasing evidence that gene location and surrounding genes influence the functionality of genes in the eukaryotic genome. Knowing the Gene Ontology Slim terms associated with a gene gives us insight into a gene's functionality by ...
Tsatsoulis Costas, Amthauer Heather A
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InfAcrOnt: calculating cross-ontology term similarities using information flow by a random walk
BMC Genomics, 2018 Background Since the establishment of the first biomedical ontology Gene Ontology (GO), the number of biomedical ontology has increased dramatically. Nowadays over 300 ontologies have been built including extensively used Disease Ontology (DO) and Human ...
Liang Cheng +6 more
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The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology [PDF]
Nucleic Acids Research, 2004 The Gene Ontology Annotation (GOA) database (http://www.ebi.ac.uk/GOA) aims to provide high-quality electronic and manual annotations to the UniProt Knowledgebase (Swiss-Prot, TrEMBL and PIR-PSD) using the standardized vocabulary of the Gene Ontology (GO).
Evelyn, Camon +9 more
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A Gene Ontology Tutorial in Python. [PDF]
, 2017 This chapter is a tutorial on using Gene Ontology resources in the Python programming language. This entails querying the Gene Ontology graph, retrieving Gene Ontology annotations, performing gene enrichment analyses, and computing basic semantic ...
Dessimoz, C., Vesztrocy, A.W.
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Primer on the Gene Ontology [PDF]
, 2016 to appear in forthcoming book "The Gene Ontology Handbook" (Springer Humana)
Gaudet, P +3 more
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Aligning the top-level of SNOMED-CT with Basic Formal Ontology [PDF]
, 2008 Effective translational research requires automated analysis of large datasets collected by multiple researchers working at multiple locations. Reliable, machine interpretation of-—and reasoning with—-large datasets assembled at different ...
William Hogan
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Improvements to cardiovascular Gene Ontology
Atherosclerosis, 2009 Gene Ontology (GO) provides a controlled vocabulary to describe the attributes of genes and gene products in any organism. Although one might initially wonder what relevance a 'controlled vocabulary' might have for cardiovascular science, such a resource is proving highly useful for researchers investigating complex cardiovascular disease phenotypes as
Lovering, Ruth C. +2 more
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Multi-label literature classification based on the Gene Ontology graph
BMC Bioinformatics, 2008 Background The Gene Ontology is a controlled vocabulary for representing knowledge related to genes and proteins in a computable form. The current effort of manually annotating proteins with the Gene Ontology is outpaced by the rate of accumulation of ...
Lu Xinghua +3 more
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Expansion of the Gene Ontology knowledgebase and resources [PDF]
, 2016 The Gene Ontology (GO) is a comprehensive resource of computable knowledge regarding the functions of genes and gene products. As such, it is extensively used by the biomedical research community for the analysis of -omics and related data.
The Gene Ontology Consortium, .
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