Results 81 to 90 of about 7,142,455 (272)

Representing kidney development using the gene ontology. [PDF]

open access: yesPLoS ONE, 2014
Gene Ontology (GO) provides dynamic controlled vocabularies to aid in the description of the functional biological attributes and subcellular locations of gene products from all taxonomic groups (www.geneontology.org).
Yasmin Alam-Faruque   +15 more
doaj   +1 more source

Single-Cell Transcript Profiling of Barley Attacked by the Powdery Mildew Fungus

open access: yesMolecular Plant-Microbe Interactions, 2007
In many plant-pathogen interactions, there are several possible outcomes for simultaneous attacks on the same leaf. For instance, an attack by the powdery mildew fungus on one barley leaf epidermal cell may succeed in infection and formation of a ...
Torben Gjetting   +5 more
doaj   +1 more source

Quality of computationally inferred gene ontology annotations. [PDF]

open access: yesPLoS Computational Biology, 2012
Gene Ontology (GO) has established itself as the undisputed standard for protein function annotation. Most annotations are inferred electronically, i.e. without individual curator supervision, but they are widely considered unreliable.
Nives Skunca   +2 more
doaj   +1 more source

Identifying disease genes using machine learning and gene functional similarities, assessed through Gene Ontology

open access: yesbioRxiv, 2018
Identifying disease genes from a vast amount of genetic data is one of the most challenging tasks in the post-genomic era. Also, complex diseases present highly heterogeneous genotype, which difficult biological marker identification.
M. Asif   +3 more
semanticscholar   +1 more source

On gene ontology and function annotation [PDF]

open access: yesBioinformation, 2006
The effort of function annotation does not merely involve associating a gene with some structured vocabulary that describes action. Rather the details of the actions, the components of the actions, the larger context of the actions are important issues that are of direct relevance, because they help understand the biological system to which the gene ...
openaire   +3 more sources

Sequence Ontology terminology for gene regulation

open access: yesBiochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms, 2021
The Sequence Ontology (SO) is a structured, controlled vocabulary that provides terms and definitions for genomic annotation. The Gene Regulation Ensemble Effort for the Knowledge Commons (GREEKC) initiative has gathered input from many groups of researchers, including the SO, the Gene Ontology (GO), and gene regulation experts, with the goal of ...
Christopher J. Mungall   +8 more
openaire   +5 more sources

Evaluation of high-throughput functional categorization of human disease genes

open access: yesBMC Bioinformatics, 2007
Background Biological data that are well-organized by an ontology, such as Gene Ontology, enables high-throughput availability of the semantic web. It can also be used to facilitate high throughput classification of biomedical information.
Li Jianrong   +4 more
doaj   +1 more source

Annotation of gene product function from high-throughput studies using the Gene Ontology

open access: yesDatabase J. Biol. Databases Curation, 2019
High-throughput studies constitute an essential and valued source of information for researchers. However, high-throughput experimental workflows are often complex, with multiple data sets that may contain large numbers of false positives.
H. Attrill   +19 more
semanticscholar   +1 more source

Metarel: an Ontology to support the inferencing of Semantic Web relations within Biomedical Ontologies [PDF]

open access: yes, 2009
While OWL, the Web Ontology Language, is often regarded as the preferred language for Knowledge Representation in the world of the Semantic Web, the potential of direct representation in RDF, the Resource Description Framework, is underestimated. Here we
Bernard De Baets   +4 more
core   +1 more source

DegoViz: An Interactive Visualization Tool for a Differentially Expressed Genes Heatmap and Gene Ontology Graph

open access: yesApplied Sciences, 2017
Microarray is a general scheme to identify differentially expressed genes for a target concept and can be used for biology. The output is presented utilizing a heatmap that biologists analyze in related terms of gene ontology to determine the ...
Somyung Oh   +3 more
doaj   +1 more source

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