Results 41 to 50 of about 2,805,831 (274)

SNP- and Haplotype-Based GWAS of Flowering-Related Traits in Maize with Network-Assisted Gene Prioritization

open access: yesAgronomy, 2019
Maize (Zea mays L.) is one of the most crucial crops for global food security worldwide. For this reason, many efforts have been undertaken to address the efficient utilization of germplasm collections.
Carlos Maldonado   +4 more
doaj   +1 more source

A guide to web tools to prioritize candidate genes [PDF]

open access: yesBriefings in Bioinformatics, 2010
Finding the most promising genes among large lists of candidate genes has been defined as the gene prioritization problem. It is a recurrent problem in genetics in which genetic conditions are reported to be associated with chromosomal regions. In the last decade, several different computational approaches have been developed to tackle this challenging
Léon-Charles Tranchevent   +5 more
openaire   +3 more sources

Knowledge-guided gene prioritization.

open access: yes, 2020
(A) In standard mode (top), each gene’s expression is tested for association with phenotypic labels, e.g., with a t test. In the (bottom) knowledge-guided mode (ProGENI algorithm), each gene’s expression is first transformed by taking into account ...
Krishna R. Kalari (8266770)   +27 more
core   +1 more source

From gene modules to gene markers: an integrated AI-human approach selects CD38 to represent plasma cell-associated transcriptional signatures

open access: yesFrontiers in Medicine
BackgroundKnowledge-driven prioritization of candidate genes derived from large-scale molecular profiling data for targeted transcriptional profiling assays is challenging due to the vast amount of biomedical literature that needs to be harnessed.
Basirudeen Syed Ahamed Kabeer   +6 more
doaj   +1 more source

Analysis of the robustness of network-based disease-gene prioritization methods reveals redundancy in the human interactome and functional diversity of disease-genes. [PDF]

open access: yesPLoS ONE, 2014
Complex biological systems usually pose a trade-off between robustness and fragility where a small number of perturbations can substantially disrupt the system.
Emre Guney, Baldo Oliva
doaj   +1 more source

Prioritization of Candidate Genes Through Boolean Networks

open access: yes, 2022
The in silico detection of master regulator genes is a popular attempt at speeding up drug development. These genes might be directly related to the onset of the disease, or may act on one pathway which counteracts the associated symptoms. Then, one could perhaps screen drugs to select chemical compounds targeting these genes.
Réda, Clémence   +1 more
openaire   +4 more sources

Drug-gene target prioritization.

open access: yes, 2018
Drug-gene target prioritization.
Rozemarijn S. van Rijn (4898842)   +10 more
core   +1 more source

USEPA/Multiscale-Landscape-Prioritization-Code: Multiscale-Landscape-Prioritization-Code

open access: yes, 2022
Public release of Multiscale-Landscape-Prioritization ...
Marc Weber
core   +1 more source

A pipeline‐friendly software tool for genome diagnostics to prioritize genes by matching patient symptoms to literature

open access: yesAdvanced Genetics, 2020
Despite an explosive growth of next‐generation sequencing data, genome diagnostics only provides a molecular diagnosis to a minority of patients. Software tools that prioritize genes based on patient symptoms using known gene‐disease associations may ...
K. Joeri van derVelde   +9 more
doaj   +1 more source

Disease Gene Prioritization

open access: yes, 2011
None
Carlos Roberto Arias   +2 more
openaire   +3 more sources

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