Results 1 to 10 of about 717,916 (306)

Four basic symmetry types in the universal 7-cluster structure of 143 complete bacterial genomic sequences [PDF]

open access: yesIn Silico Biol. 5, 0025 (2005) http://www.bioinfo.de/isb/2005/05/0025/, 2004
Coding information is the main source of heterogeneity (non-randomness) in the sequences of bacterial genomes. This information can be naturally modeled by analysing cluster structures in the "in-phase" triplet distributions of relatively short genomic fragments (200-400bp).
Gorban, A.N.   +2 more
arxiv   +3 more sources

Genomic and Chemical Diversity of Bacillus subtilis Secondary Metabolites against Plant Pathogenic Fungi

open access: yesmSystems, 2021
Bacillus subtilis produces a wide range of secondary metabolites providing diverse plant growth-promoting and biocontrol abilities. These secondary metabolites include nonribosomal peptides with strong antimicrobial properties, causing either cell lysis,
Heiko T. Kiesewalter   +10 more
doaj   +1 more source

Genome sequences of 15 Gardnerella vaginalis strains isolated from the vaginas of women with and without bacterial vaginosis [PDF]

open access: yes, 2016
Gardnerella vaginalis is a predominant species in bacterial vaginosis, a dysbiosis of the vagina that is associated with adverse health outcomes, including preterm birth.
Lek, Sai   +7 more
core   +9 more sources

Comparison of Illumina and Oxford Nanopore Technology for genome analysis of Francisella tularensis, Bacillus anthracis, and Brucella suis

open access: yesBMC Genomics, 2023
Background Bacterial epidemiology needs to understand the spread and dissemination of strains in a One Health context. This is important for highly pathogenic bacteria such as Bacillus anthracis, Brucella species, and Francisella tularensis. Whole genome
Jörg Linde   +6 more
doaj   +1 more source

Analysis of the complete genome sequences of Clostridium perfringens strains harbouring the binary enterotoxin BEC gene and comparative genomics of pCP13-like family plasmids

open access: yesBMC Genomics, 2022
Background BEC-producing Clostridium perfringens is a causative agent of foodborne gastroenteritis. It was first reported in 2014, and since then, several isolates have been identified in Japan and the United Kingdom.
Kengo Ueda   +14 more
doaj   +1 more source

Bacterial DNA involvement in carcinogenesis

open access: yesFrontiers in Cellular and Infection Microbiology, 2022
The incidence of cancer is high worldwide, and biological factors such as viruses and bacteria play an important role in the occurrence of cancer. Helicobacter pylori, human papillomavirus, hepatitis B viruses and other organisms have been identified as ...
Wang Yangyanqiu   +5 more
doaj   +1 more source

Whole Genome Sequencing for Studying Bacillus anthracis from an Outbreak in the Abruzzo Region of Italy

open access: yesMicroorganisms, 2020
Anthrax is a serious infectious disease caused by the gram-positive and spore-forming bacterium Bacillus anthracis. In Italy, anthrax is an endemic disease with sporadic cases each year and few outbreaks, especially in Southern Italy.
Alexandra Chiaverini   +9 more
doaj   +1 more source

Warmer and drier ecosystems select for smaller bacterial genomes in global soils

open access: yesiMeta, 2023
Bacterial genome size reflects bacterial evolutionary processes and metabolic lifestyles, with implications for microbial community assembly and ecosystem functions.
Hongwei Liu   +5 more
doaj   +1 more source

Bacteria-human somatic cell lateral gene transfer is enriched in cancer samples. [PDF]

open access: yesPLoS Computational Biology, 2013
There are 10× more bacterial cells in our bodies from the microbiome than human cells. Viral DNA is known to integrate in the human genome, but the integration of bacterial DNA has not been described. Using publicly available sequence data from the human
David R Riley   +6 more
doaj   +1 more source

Bacterial riboproteogenomics : the era of N-terminal proteoform existence revealed [PDF]

open access: yes, 2020
With the rapid increase in the number of sequenced prokaryotic genomes, relying on automated gene annotation became a necessity. Multiple lines of evidence, however, suggest that current bacterial genome annotations may contain inconsistencies and are ...
Fijalkowska, Daria   +3 more
core   +2 more sources

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