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Genome-wide association analysis using multiple Atlantic salmon populations [PDF]

open access: yesGenetics Selection Evolution
Background In a previous study, we found low persistence of linkage disequilibrium (LD) phase across breeding populations of Atlantic salmon. Accordingly, we observed no increase in accuracy from combining these populations for genomic prediction.
Afees A. Ajasa   +3 more
doaj   +6 more sources

SNP set association analysis for genome-wide association studies. [PDF]

open access: yesPLoS ONE, 2013
Genome-wide association study (GWAS) is a promising approach for identifying common genetic variants of the diseases on the basis of millions of single nucleotide polymorphisms (SNPs).
Min Cai   +9 more
doaj   +4 more sources

Genome-Wide Association Analysis of Soybean Regeneration-Related Traits and Functional Exploration of Candidate Genes [PDF]

open access: yesPlants
Using the cotyledonary node method, four traits related to callus induction rate were identified in 185 soybean germplasm resources. Cultivation of callus tissue is crucial for soybean (Glycine max (L.) Merr.) genetic transformation and functional ...
Huiyan Zhao   +8 more
doaj   +2 more sources

Gastric cancer prognosis-related single nucleotide polymorphisms: a genome-wide association analysis

open access: yesZhongguo gonggong weisheng, 2023
ObjectiveTo explore the association of genome-wide single nucleotide polymorphisms (SNPs) with the prognosis of gastric cancer (GC) for identifying new prognostic biomarkers and developing personalized treatment strategies for GC.
Nan REN   +3 more
doaj   +1 more source

Robust Gene-Gene Interaction Analysis in Genome Wide Association Studies. [PDF]

open access: yesPLoS ONE, 2015
Genome-wide association studies (GWAS) have successfully discovered hundreds of associations between genetic variants and complex traits. Most GWAS have focused on the identification of single variants.
Yongkang Kim, Taesung Park
doaj   +1 more source

Genome-Wide Association Study of Hepatitis in Korean Populations [PDF]

open access: yesGenomics & Informatics, 2014
Hepatitis is a common and serious disease for the Korean population. It is caused by a virus, the A and B types of which are plentiful in Koreans. In this study, we tried to find genetic factors for hepatitis through genome-wide association studies.
Youngbok Hong, Sejong Oh
doaj   +1 more source

Genetic differences according to onset age and lung function in asthma: A cluster analysis

open access: yesClinical and Translational Allergy, 2023
Background The extent of differences between genetic risks associated with various asthma subtypes is still unknown. To better understand the heterogeneity of asthma, we employed an unsupervised method to identify genetic variants specifically associated
Han‐Kyul Kim   +11 more
doaj   +1 more source

Genome‐wide association analysis of chilling‐tolerant germination in a new maize association mapping panel

open access: yesFood and Energy Security, 2023
Maize is a crop that is highly susceptible to the negative effects of low temperature. Low temperature can delay seed germination and cause a decrease in seed vigor, which seriously affects seedling emergence and yield.
Yun Ma   +7 more
doaj   +1 more source

Genome wide association analysis of cuticle deposition in laying hens

open access: yesPoultry Science, 2023
: The cuticle is an invisible barrier that protects the internal egg contents from microorganisms entering through gas exchange pores. Eggs which have a good cuticle are least likely to be penetrated by microorganisms and improved cuticle cover should ...
Zhang Wang   +8 more
doaj   +1 more source

Genome wide association analysis for yield related traits in maize

open access: yesBMC Plant Biology, 2022
Background Understanding the genetic basis of yield related traits contributes to the improvement of grain yield in maize. Results Using 291 excellent maize inbred lines as materials, six yield related traits of maize, including grain yield per plant ...
Tingru Zeng   +7 more
doaj   +1 more source

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