Results 101 to 110 of about 1,891,272 (273)
A Compressed Self-Index for Genomic Databases [PDF]
arXiv, 2011 Advances in DNA sequencing technology will soon result in databases of thousands of genomes. Within a species, individuals' genomes are almost exact copies of each other; e.g., any two human genomes are 99.9% the same. Relative Lempel-Ziv (RLZ) compression takes advantage of this property: it stores the first genome uncompressed or as an FM-index, then
arxiv
Molecular Oncology, EarlyView.VASP was found to be overexpressed in metastatic oral squamous cell carcinoma (OSCC) tissues. Notably, PTTG1‐ and VASP‐deficient OSCC cells demonstrated suppressed metastatic properties by disrupting the interaction between the cytoskeleton and focal adhesion (FAs) in the filopodia region.
Suyeon Park +6 more
wiley +1 more source
EFFECTS OF THE D GENOME ON MILLING AND BAKING PROPERTIES OF WHEAT [PDF]
, 1969 E. R. Kerber, Karen Tipples
openalex +1 more source
Mapping to a Reference Genome Structure [PDF]
arXiv, 2014 To support comparative genomics, population genetics, and medical genetics, we propose that a reference genome should come with a scheme for mapping each base in any DNA string to a position in that reference genome. We refer to a collection of one or more reference genomes and a scheme for mapping to their positions as a reference structure.
arxiv
Molecular Oncology, EarlyView.Consensus molecular subtypes (CMS1‐4) have been identified to study colorectal cancer heterogeneity and serve as potential biomarkers. In this study, we developed and evaluated NanoCMSer, a NanoString‐based classifier using 55 genes, optimized for FF and FFPE to facilitate the clinical evaluation of CMS subtyping.
Arezo Torang +10 more
wiley +1 more source
A method for determining the fraction of the viral genome transcribed during infection and its application to adenovirus-infected cells. [PDF]
, 1968 Kei Fujinaga, S Mak, M Green
openalex +1 more source
copMEM: Finding maximal exact matches via sampling both genomes [PDF]
arXiv, 2018 Genome-to-genome comparisons require designating anchor points, which are given by Maximum Exact Matches (MEMs) between their sequences. For large genomes this is a challenging problem and the performance of existing solutions, even in parallel regimes, is not quite satisfactory.
arxiv
Molecular Oncology, EarlyView.Tumor microenvironment drives cancer formation and progression. We analyzed the role of human cancer‐associated adipocytes from patients with renal cell carcinoma (RCC) stratified as lean, overweight, or obese. RNA‐seq demonstrated that, among the most altered genes involved in the tumor–stroma crosstalk, are ADAM12 and CYP1B1, which were proven to be ...
Sepehr Torabinejad +13 more
wiley +1 more source
Sociologies, 2019 The article retains four types of codes and intelligences, according to their historical order of appearance: 1) DNA codes, associated with genomic intelligence, 2) neural codes, associated with sensory-motor intelligence, 3) linguistic codes, associated
André Petitat
doaj
VARIATION IN THE ONCOGENIC POTENTIAL OF HUMAN ADENOVIRUSES CARRYING A DEFECTIVE SV40 GENOME (PARA) [PDF]
, 1968 Fred Rapp +3 more
openalex +1 more source