Results 21 to 30 of about 4,627,574 (329)
Roary: rapid large-scale prokaryote pan genome analysis
bioRxiv, 2015 Summary A typical prokaryote population sequencing study can now consist of hundreds or thousands of isolates. Interrogating these datasets can provide detailed insights into the genetic structure of of prokaryotic genomes.
Andrew J. Page +9 more
semanticscholar +1 more source
Genome sequence of a novel alloherpesvirus isolated from glass catfish (Kryptopterus bicirrhis) [PDF]
, 2018 The 149,343-bp genome of silurid herpesvirus 1, which was isolated in Thailand from glass catfish, was sequenced. The genome was most closely related to that of ictalurid herpesvirus 2, which infects black bullhead catfish. To our knowledge, this was the
Davison, Andrew J. +5 more
core +1 more source
PLoS ONE, 2014 Advances in modern sequencing technologies allow us to generate sufficient data to analyze hundreds of bacterial genomes from a single machine in a single day.
B. J. Walker +10 more
semanticscholar +1 more source
100K Pathogen Genome Project. [PDF]
, 2017 The 100K Pathogen Genome Project is producing draft and closed genome sequences from diverse pathogens. This project expanded globally to include a snapshot of global bacterial genome diversity.
Weimer, Bart C
core +1 more source
Genome Research, 2010 Next-generation DNA sequencing (NGS) projects, such as the 1000 Genomes Project, are already revolutionizing our understanding of genetic variation among individuals.
A. McKenna +10 more
semanticscholar +1 more source
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
BMC Bioinformatics, 2011 BackgroundRNA-Seq is revolutionizing the way transcript abundances are measured. A key challenge in transcript quantification from RNA-Seq data is the handling of reads that map to multiple genes or isoforms.
Bo Li, Colin N. Dewey
semanticscholar +1 more source
GenomeFingerprinter and universal genome fingerprint analysis for systematic comparative genomics [PDF]
, 2013 How to compare whole genome sequences at large scale has not been achieved via conventional methods based on pair-wisely base-to-base comparison; nevertheless, no attention was paid to handle in-one-sitting a number of genomes crossing genetic category ...
Ai, Hannan +3 more
core +4 more sources
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
Genome Biology, 2009 Bowtie is an ultrafast, memory-efficient alignment program for aligning short DNA sequence reads to large genomes. For the human genome, Burrows-Wheeler indexing allows Bowtie to align more than 25 million reads per CPU hour with a memory footprint of ...
Ben Langmead +3 more
semanticscholar +1 more source
The Douglas-Fir Genome Sequence Reveals Specialization of the Photosynthetic Apparatus in Pinaceae. [PDF]
, 2017 A reference genome sequence for Pseudotsuga menziesii var. menziesii (Mirb.) Franco (Coastal Douglas-fir) is reported, thus providing a reference sequence for a third genus of the family Pinaceae.
Cardeno, Charis +21 more
core +2 more sources
Nutrigenomics: The science of the 21st century [PDF]
Vojnosanitetski Pregled, 2011 nema
Stojanović Dušica, Marković Danica
doaj +1 more source