Results 41 to 50 of about 2,597,991 (390)
Nature Genetics, 2021 Rye is a valuable food and forage crop, an important genetic resource for wheat and triticale improvement and an indispensable material for efficient comparative genomic studies in grasses.
Guangwei Li +32 more
semanticscholar +1 more source
Versatile genome assembly evaluation with QUAST-LG
Bioinform., 2018 Motivation The emergence of high‐throughput sequencing technologies revolutionized genomics in early 2000s. The next revolution came with the era of long‐read sequencing.
Alla Mikheenko +4 more
semanticscholar +1 more source
Nature Genetics, 2021 Tea is an important global beverage crop and is largely clonally propagated. Despite previous studies on the species, its genetic and evolutionary history deserves further research. Here, we present a haplotype-resolved assembly of an Oolong tea cultivar,
Xingtan Zhang +32 more
semanticscholar +1 more source
The Douglas-Fir Genome Sequence Reveals Specialization of the Photosynthetic Apparatus in Pinaceae. [PDF]
, 2017 A reference genome sequence for Pseudotsuga menziesii var. menziesii (Mirb.) Franco (Coastal Douglas-fir) is reported, thus providing a reference sequence for a third genus of the family Pinaceae.
Cardeno, Charis +21 more
core +2 more sources
Wellcome Open Research, 2021 We present a genome assembly from an individual female Rana temporaria (the common frog; Chordata; Amphibia; Anura; Ranidae). The genome sequence is 4.11 gigabases in span.
Jeffrey W. Streicher
doaj +1 more source
Chromosome-scale and haplotype-resolved genome assembly of a tetraploid potato cultivar
Nature Genetics, 2021 Potato is the most widely produced tuber crop worldwide. However, reconstructing the four haplotypes of its autotetraploid genome remained an unsolved challenge.
Hequan Sun +8 more
semanticscholar +1 more source
Phased diploid genome assembly with single-molecule real-time sequencing
Nature Methods, 2016 While genome assembly projects have been successful in many haploid and inbred species, the assembly of noninbred or rearranged heterozygous genomes remains a major challenge.
C. Chin +16 more
semanticscholar +1 more source
Gfastats: conversion, evaluation and manipulation of genome sequences using assembly graphs
bioRxiv, 2022 Motivation With the current pace at which reference genomes are being produced, the availability of tools that can reliably and efficiently generate genome assembly summary statistics has become critical.
G. Formenti +7 more
semanticscholar +1 more source
A Gapless, Unambiguous Genome Sequence of the Enterohemorrhagic Escherichia coli O157:H7 Strain EDL933. [PDF]
, 2014 Escherichia coli EDL933 is the prototypic strain for enterohemorrhagic E. coli serotype O157:H7, associated with deadly food-borne outbreaks. Because the publicly available sequence of the EDL933 genome has gaps and >6,000 ambiguous base calls, we ...
Aziz, Ramy K +4 more
core +2 more sources
NOVOPlasty: de novo assembly of organelle genomes from whole genome data
Nucleic Acids Research, 2016 The evolution in next-generation sequencing (NGS) technology has led to the development of many different assembly algorithms, but few of them focus on assembling the organelle genomes.
Nicolas Dierckxsens +2 more
semanticscholar +1 more source