Results 51 to 60 of about 4,666,723 (353)
A pseudomolecule assembly of the Rocky Mountain elk genome. [PDF]
, 2021 Rocky Mountain elk (Cervus canadensis) populations have significant economic implications to the cattle industry, as they are a major reservoir for Brucella abortus in the Greater Yellowstone area.
Olsen, Steven +23 more
core +1 more source
Integrating genome assemblies with MAIA [PDF]
Bioinformatics, 2010 Abstract Motivation: De novo assembly of a eukaryotic genome with next-generation sequencing data is still a challenging task. Over the past few years several assemblers have been developed, often suitable for one specific type of sequencing data.
Jurgen F. Nijkamp +5 more
openaire +4 more sources
Targeted Assembly of Short Sequence Reads [PDF]
, 2011 As next-generation sequence (NGS) production continues to increase, analysis is becoming a significant bottleneck. However, in situations where information is required only for specific sequence variants, it is not necessary to assemble or align whole ...
Rene L. Warren +7 more
core +2 more sources
Data in Brief, 2022 Trichoderma asperellum PK1J2 is a promising cellulase-producing fungus isolated from a palm empty fruit bunch in Riau, Indonesia. Presented here is the genome assembly of T. asperellum PK1J2.
Fela Laila Nur Hidayati +4 more
doaj +1 more source
Chromosome-scale genome assembly of the transformation-amenable common wheat cultivar ‘Fielder’
DNA Research, 2021 We have established a high-quality, chromosome-level genome assembly for the hexaploid common wheat cultivar ‘Fielder’, an American, soft, white, pastry-type wheat released in 1974 and known for its amenability to Agrobacterium tumefaciens-mediated ...
Kazuhiro Sato +7 more
semanticscholar +1 more source
ling-lyang/Leptodactylus-fuscus-genome: de novo genome assembly of Leptodactylus fuscus
, 2021 A de novo genome assembly of Leptodactylus ...
Lu "Ling" Yang
core +1 more source
Beware of mis-assembled genomes [PDF]
Bioinformatics, 2005 With hundreds of genomes now in GenBank, researchers might be forgiven for assuming that genome sequence data are correct, at least at a large scale. Certainly there might be errors at some small rate, perhaps 1 in 50 000 or 100 000 bases (Schmutz et al., 2004; Read et al., 2002), but at a large scale these genomes are put together correctly, are not ...
Steven Salzberg, James A. Yorke
openaire +2 more sources
Nature Communications, 2021 Camptothecin and its derivatives are widely used for treating malignant tumors. Previous studies revealed only a limited number of candidate genes for camptothecin biosynthesis in Camptotheca acuminata, and it is still poorly understood how its ...
Ming-Hui Kang +9 more
semanticscholar +1 more source
The genome sequence of Inga leiocalycina Benth. [version 1; peer review: 2 approved]
Wellcome Open ResearchWe present a genome assembly from an individual of Inga leiocalycina (Streptophyta; Magnoliopsida; Fabales; Fabaceae). The genome sequence has a total length of 948.00 megabases. Most of the assembly is scaffolded into 13 chromosomal pseudomolecules. The
R. Toby Pennington +5 more
doaj +1 more source
AFLAP: assembly-free linkage analysis pipeline using k-mers from genome sequencing data
Genome Biology, 2021 Our assembly-free linkage analysis pipeline (AFLAP) identifies segregating markers as k-mers in the raw reads without using a reference genome assembly for calling variants and provides genotype tables for the construction of unbiased, high-density ...
Kyle Fletcher +5 more
doaj +1 more source