Results 81 to 90 of about 1,502,773 (308)

A Comparison of Microbial Genome Web Portals [PDF]

Frontiers in Microbiology, 2019
Microbial genome web portals have a broad range of capabilities that address a number of information-finding and analysis needs for scientists. This article compares the capabilities of the major microbial genome web portals to aid researchers in determining which portal(s) are best suited to solving their information-finding and analytical needs.
Karp, Peter D, Ivanova, Natalia, Krummenacker, Markus, Kyrpides, Nikos, Latendresse, Mario, Midford, Peter, Ong, Wai Kit, Paley, Suzanne, Seshadri, Rekha   +8 more
openaire   +6 more sources

Large Scale Genome Analysis Shows that the Epitopes for Broadly Cross-Reactive Antibodies Are Predominant in the Pandemic 2009 Influenza Virus A H1N1 Strain

Viruses, 2013
The past pandemic strain H1N1 (A (H1N1)pdm09) has now become a common component of current seasonal influenza viruses. It has changed the pre-existing immunity of the human population to succeeding infections.
Edgar E. Lara-Ramírez, Aldo Segura-Cabrera, Ma Isabel Salazar, Mario A. Rodríguez-Pérez, Xianwu Guo   +4 more
doaj   +1 more source

Comparative Genomic Analysis and Species Delimitation: A Case for Two Species in the Zoonotic Cestode Dipylidium caninum

Pathogens, 2023
Dipylidium caninum (Linnaeus, 1758) is a common zoonotic cestode of dogs and cats worldwide. Previous studies have demonstrated the existence of largely host-associated canine and feline genotypes based on infection studies, differences at the 28S rDNA ...
Jeba R. J. Jesudoss Chelladurai, Aloysius Abraham, Theresa A. Quintana, Deb Ritchie, Vicki Smith   +4 more
doaj   +1 more source

Sequence organisation and conservation at homeologous regions ln the recent allotetraploid coffee (Coffea arabica L.) [PDF]

, 2009
Coffee is one of the world's largest traded commodities produced in more than 60 countries. Coffee species belong to the Rubiaceae family and commercial coffee production relies mainly on two closely related species: Coffea arabica and C.
Cenci, Alberto, Combes, Marie-Christine, Etienne, Hervé, Lashermes, Philippe, Ribas, Alessandra   +4 more
core  

Genome of the Avirulent Human-Infective Trypanosome—Trypanosoma rangeli [PDF]

, 2014
Background: Trypanosoma rangeli is a hemoflagellate protozoan parasite infecting humans and other wild and domestic mammals across Central and South America.
A Buschiazzo, AC Frasch, AC Ivens, AL Price, Alexandra Gerber, Ana Tereza Ribeiro de Vasconcelos, Arnaldo Zaha, B Li, B Roure, Björn Andersson, C Biemont, C Folgueira, CA Buscaglia, CA Buscaglia, Carlos Talavera-Lopez, CB Lira, CB Toaldo, CE Butler, Claudia Elizabeth Thompson, CP Pena, CS Peacock, D Bahia, D Bahia, D Cosentino-Gomes, D Ekanayake, D Horn, D Miranda-Saavedra, D Salmon, DA Largaespada, DA Urrea, DA Urrea, Daniella Castanheira Bartholomeu, DC Bartholomeu, DG Passos-Silva, Diana Bahia, DM Martin, Débora Denardin Lückemeyer, E Ghedin, EC Grisard, EC Grisard, Edmundo Carlos Grisard, EJ Tobie, EL Raven, Elgion Loreto, Elisa Beatriz Prestes, F Corpet, F Guhl, F Guhl, F Maia Da Silva, F Maia da Silva, F Maia da Silva, F Sievers, FB Nogueira, Fábio Mitsuo Lima, G Benson, G Wagner, GA Vallejo, GA Vallejo, GA Vallejo, Gabriela Rodrigues-Luiz, Glauber Wagner, Gustavo Adolfo Vallejo, H Castro, H Diez, H Diez, H Diez, H Ngo, H Shi, H Shi, HA Schmidt, HG van Luenen, HS Kim, I Kamileri, I Romero, J Baum, J Fonager, J Henriksson, J Jurka, JD Damasceno, JE Vasquez, Jessica C. Kissinger, JF Turrens, JH Lee, JL Affranchino, JL Parsons, José Franco da Silveira Filho, JV Bannister, K Ersfeld, K Strimmer, KA Norris, Karina Mariante Monteiro, Kevin Morris Tyler, KL Patrick, L Piacenza, L Piacenza, LF Lye, LG Almeida, LJ Cliffe, LM Freitas, Luiz Gonzaga Paula de Almeida, M Berriman, M Cabrine-Santos, M Cabrine-Santos, M Schramp, M Steindel, MA Chiurillo, MA de Sousa, Mauro Freitas Ortiz, MB Rogers, MC Elias, MC Motta, MD Pineyro, MF Amaya, MH de Moraes, MH Saier Jr, MI Cano, Miguel Angel Chiurillo, Milene Höehr de Moraes, MJ Fraser Jr, MJ Schofield, MM Kangussu-Marcolino, MP Wymann, MR Briones, MR Garcia Silva, MT Tammi, Mário Steindel, N Anez-Rojas, N Añez, N Inoue, N Saitou, NM El-Sayed, NM El-Sayed, O Franzen, O Franzen, Oberdan de Lima Cunha, P Luciano, Patrícia Hermes Stoco, R Bosotti, R Marone, RD Page, RL Barnes, Rondon Mendonça-Neto, Rosane Silva, RR Moraes Barros, RT Souza, S Cestari Idos, S Kumar, S Martinez-Calvillo, S Muller, S Schenkman, Santuza Maria Ribeiro Teixeira, SF Altschul, Silvane Maria Fonseca Murta, SJ Westenberger, SL dos Santos, SM Teixeira, SR Wilkinson, SR Wilkinson, SR Wilkinson, SS Dc-Rubin, Sérgio Schenkman, T Downing, TA Minning, TA Pitcovsky, Thais Cristine Marques Sincero, Tiago Antonio de Oliveira Mendes, Turán Peter Urmenyi, Viviane Grazielle Silva, Wanderson Duarte DaRocha, WD DaRocha, X Huang, ZC Caballero, Álvaro José Romanha   +172 more
core   +3 more sources

Rab14 regulates the transport of human papillomavirus to the trans‐Golgi network for infectious cell entry

FEBS Letters, EarlyView.
This study reveals that the small GTPase Rab14 is necessary for human papillomavirus (HPV) infection and plays an essential role in the transport of virions to the trans‐Golgi network (TGN). HPV in the early endosome (EE), which harbors GTP‐bound Rab14, is transported to the TGN through the switch of Rab14 from its GTP‐bound to GDP‐bound form.
Yoshiyuki Ishii, Iwao Kukimoto
wiley   +1 more source

Transcriptional network analysis of PTEN‐protein‐deficient prostate tumors reveals robust stromal reprogramming and signs of senescent paracrine communication

Molecular Oncology, Volume 20, Issue 6, Page 1429-1452, June 2026.
Combining PTEN protein assessment and transcriptomic profiling of prostate tumors, we uncovered a network enriched in senescence and extracellular matrix (ECM) programs associated with PTEN loss and conserved in a mouse model. We show that PTEN‐deficient cells trigger paracrine remodeling of the surrounding stroma and this information could help ...
Ivana Rondon‐Lorefice, Jose I. Lopez, Aitziber Ugalde‐Olano, Maite Zufiaurre, Ianire Astobiza, Natalia Martin‐Martin, Laura Bozal‐Basterra, Saioa Garcia‐Longarte, Amaia Zabala‐Letona, Sofia Rey, Aida Santos‐Martin, Miguel Unda, Ana Loizaga‐Iriarte, Mariona Graupera, Paolo Nuciforo, Arkaitz Carracedo, Isabel Mendizabal   +16 more
wiley   +1 more source

A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms [PDF]

, 2004
We describe a genetic variation map for the chicken genome containing 2.8 million single-nucleotide polymorphisms ( SNPs). This map is based on a comparison of the sequences of three domestic chicken breeds ( a broiler, a layer and a Chinese silkie) with
Aerts, Andrea, Andersson, Björn, Andersson, Leif, Bartley, Neil, Boardman, Paul E, Bovenhuis, Henk, Brandström, Mikael, Bumstead, Nat, Burt, David W, Chen, Chen, Chen, Jie, Cheng, Hans H, Consortium, International Chicken Polymorphism Map, Crooijmans, Richard P M A, Dai, Mingtao, de Koning, Dirk-Jan, Dong, Le, Dong, Wei, Ellegren, Hans, Glavina, Tijana, Gordon, Laurie, Groenen, Martien A M, Gunnarsson, Ulrika, Hao, Bailin, He, Dandan, He, Ximiao, Hillier, Ladeana W, Hocking, Paul M, Hu, Songnian, Huang, Xiangang, Huang, Yanqing, Hubbard, Simon J, Hunt, Henry, Kaiser, Pete, Kaufman, Jim, Kindlund, Ellen, Lamont, Susan J, Lan, Fengdi, Law, Andy, Li, Dawei, Li, Guangyuan, Li, Guoqing, Li, Heng, Li, Jun, Li, Ning, Li, Ruiqiang, Li, Shengting, Li, Songgang, Li, Wenjie, Li, Yuanzhe, Lin, Wei, Liu, Bin, Lucas, Susan, Meng, Qingshun, Morrice, David, Ni, Peixiang, Ovcharenko, Ivan, Overton, Ian M, Ponting, Chris, Qi, Qiuhui, Ran, Longhua, Rogers, Sally, Rothwell, Lisa, Ruan, Jue, Shi, Jianping, Stubbs, Lisa, Sun, Yongqiao, Tammi, Martti T, Tang, Haizhou, Tong, Wei, van der Poel, Jan J, van Hateren, Andy, Wahlberg, Per, Walker, Brian A, Wang, Jian, Wang, Jianjun, Wang, Jing, Wang, Jun, Wang, Miaoheng, Wang, Pei, Wang, Xiaoling, Warren, Wesley C, Webber, Caleb, Wei, Dong Qing, Wei, Ning, Wilson, Richard K, Wilson, Stuart A, Wong, Gane Ka-Shu, Xi, Yan, Xie, Fei, Yang, Huanming, Yang, Ning, Yang, Shiaw-Pyng, Yang, Xu, Yang, Zheng, Ye, Chen, Ye, Jia, Young, John R, Yu, Jun, Yu, Yingpu, Zeng, Changqing, Zhang, Jianguo, Zhang, Jingjing, Zhang, Xiaowei, Zhang, Yunze, Zhang, Zengjin, Zhang, Zhenpeng, Zhang, Zhi-Yong, Zhao, Wenming, Zhao, Yiqiang, Zheng, Hongkun, Zheng, Weimou, Zhou, Huaijun, Zhou, Jun, Zhou, Yan   +114 more
core   +3 more sources

PARP inhibition and pharmacological ascorbate demonstrate synergy in castration‐resistant prostate cancer

Molecular Oncology, Volume 20, Issue 6, Page 1626-1642, June 2026.
Pharmacologic ascorbate (vitamin C) increases ROS, disrupts cellular metabolism, and induces DNA damage in CRPC cells. These effects sensitize tumors to PARP inhibition, producing synergistic growth suppression with olaparib in vitro and significantly delayed tumor progression in vivo. Pyruvate rescue confirms ROS‐dependent activity.
Nicolas Gordon, Peter T. Gallagher, Orly I. Richter, Neermala Poudel Neupane, Amy C. Mandigo, Jennifer J. McCann, Emanuela Dylgjeri, Irina Vasilevskaya, Christopher McNair, Channing J. Paller, Wm. Kevin Kelly, Karen E. Knudsen, Matthew J. Schiewer, Ayesha A. Shafi   +13 more
wiley   +1 more source

Comparison of methods for the selection of genomic biomarkers [PDF]

International Journal of Data Mining and Bioinformatics, 2013
In recent years, a lot of attention is placed on the selection and evaluation of biomarkers in microarray experiments. Two sets of biomarkers are of importance, namely therapeutic and prognostic. The therapeutic biomarkers would give us information on the response of the genes to treatment in relation to the response of the clinical outcome to the same
Dan Lin 0004, Abel Tilahun, José Cortiñas Abrahantes, Ziv Shkedy, Geert Molenberghs, Hinrich W. H. Göhlmann, Willem Talloen, Luc Bijnens   +7 more
openaire   +3 more sources