Results 91 to 100 of about 3,470,657 (312)

The complete chloroplast genome of Solanum berthaultii, one of the potato wild relative species

Mitochondrial DNA. Part B. Resources, 2017
Solanum berthaultii is a wild species belonging to Solanaceae family. The complete chloroplast genome of S. berthaultii was constituted by de novo assembly using a small amount of whole genome sequencing data. The chloroplast genome of S. berthaultii was
Tae-Ho Park
doaj   +1 more source

Evaluation of genome sequencing quality in selected plant species using expressed sequence tags. [PDF]

PLoS ONE, 2013
BACKGROUND: With the completion of genome sequencing projects for more than 30 plant species, large volumes of genome sequences have been produced and stored in online databases.
Lingfei Shangguan, Jian Han, Emrul Kayesh, Xin Sun, Changqing Zhang, Tariq Pervaiz, Xicheng Wen, Jinggui Fang   +7 more
doaj   +1 more source

From junk to function — How weak selection in eukaryotes builds new parts and drives genomic complexity

FEBS Letters, EarlyView.
How do genomes gain new functional parts? In eukaryotes, which tend to evolve under weak selection, much of the genome is junk. Palazzo and Qiu borrow the logic of Markov chains to show how non‐functional DNA becomes functional through the appearance of intermediate states, which arise due to epistasis, buffering, and biochemical messiness, allowing ...
Alexander F. Palazzo, Yi Qiu
wiley   +1 more source

Whole-genome sequencing confirms that Burkholderia pseudomallei multilocus sequence types common to both Cambodia and Australia are due to homoplasy [PDF]

, 2014
Whole-genome sequencing of the four isolates used in this study was supported by Wellcome Trust grant 098051, awarded to the Wellcome Trust Sanger Institute.
Theobald, V, Vandamme, P, Jacobs, J A, Vandamme, Peter, Currie, Bart J, Holden, Matthew T G, Jacobs, Jan, Jacobs, JA, Price, Erin P, Spratt, BG, Peacock, S J, Jacobs, Jan A, Parkhill, J, Holden, Matthew TG, Sarovich, DS, Sarovich, Derek S, Spratt, Brian G, Theobald, Vanessa, De Smet, B, Kham, Chun, Thong, P, Spratt, B G, Heng, Seiha, Holden, MT, Heng, S, Price, EP, Peacock, SJ, Currie, B J, Phe, Thong, Mayo, Mark, Holden, M T G, Parkhill, Julian, Mayo, M, Thong, Phe, Kham, C, De Smet, Birgit, Currie, BJ, Peacock, Sharon J, Sarovich, D S, Holden, Matthew T G; id_orcid   +39 more
core   +1 more source

Sequencing the Rice Genome [PDF]

The Plant Cell, 2000
Rice ( Oryza sativa ) is one of the most important crops in the world. Rice, wheat, and maize together account for about half of the world’s food production, and rice itself is the principal food of half of the world’s population ([Sasaki and Burr, 2000][1]).
openaire   +2 more sources

The Sequenced Angiosperm Genomes and Genome Databases [PDF]

Frontiers in Plant Science, 2018
Angiosperms, the flowering plants, provide the essential resources for human life, such as food, energy, oxygen, and materials. They also promoted the evolution of human, animals, and the planet earth. Despite the numerous advances in genome reports or sequencing technologies, no review covers all the released angiosperm genomes and the genome ...
Chen, Fei, Dong, Wei, Zhang, Jiawei, Guo, Xinyue, Chen, Junhao, Wang, Zhengjia, Lin, Zhenguo, Tang, Haibao, Zhang, Liangsheng   +8 more
openaire   +3 more sources

The Shewanella oneidensis Fic enzyme SoFic targets the switch‐I region of EF‐Tu for AMPylation

FEBS Letters, EarlyView.
Fic enzymes mediate diverse post‐translational modifications across all domains of life, including AMPylation. Prokaryotic EF‐Tu can be AMPylated and deAMPylated by the conserved Fic enzyme SoFic. Structural and biochemical approaches were used to characterize the effect of AMPylation on EF‐Tu, SoFic's enzymatic activities, and the enzyme‐target ...
Svenja Runge, Vivian Pogenberg, Alexander Baumgart, Bente Siebels, Hartmut Schlüter, Michael Hecht‐Bucher, Aymelt Itzen   +6 more
wiley   +1 more source

BACCardI - a tool for the validation of genomic assemblies, assisting genome finishing and intergenome comparison [PDF]

, 2004
Bartels D, Kespohl S, Albaum S, et al. BACCardI - a tool for the validation of genomic assemblies, assisting genome finishing and intergenome comparison. Bioinformatics.
Kespohl, Sebastian, Drüke, Tanja, Albaum, Stefan ; https://orcid.org/, Bartels, Daniela, Kaiser, Olaf, Goesmann, Alexander ; https://orcid.org/, Pühler, Alfred ; https://orcid.org/, Schuster, Stephan C., Raddatz, Günter, Stoye, Jens ; https://orcid.org/, Herold, Julia, Pfeiffer, Friedhelm, Meyer, Folker, Günter Raddatz, Stephan C. Schuster, Daniela Bartels, Alexander Goesmann, Olaf Kaiser, Jens Stoye, Folker Meyer, Friedhelm Pfeiffer, Alfred Pühler, Julia Herold   +21 more
core   +1 more source

A new and improved genome sequence of Cannabis sativa

GigaByte, 2020
Cannabis is a diploid species (2n = 20), the estimated haploid genome sizes of the female and male plants using flow cytometry are 818 and 843 Mb respectively.
Shivraj Braich , Rebecca C. Baillie , German C. Spangenberg , Noel O. I. Cogan   +3 more
doaj   +1 more source

L‐aspartate oxidase provides new insights into fumarate reduction in anaerobic darkness in Synechocystis sp. PCC6803

FEBS Letters, EarlyView.
Synechocystis strains deficient in succinate dehydrogenase (SDH) secrete more succinate than the WT under dark anaerobic conditions, supporting that SDH then primarily acts as SDH, not as a fumarate reductase. L‐aspartate oxidase (Laspo) from Synechocystis is functional under anaerobic conditions, reducing fumarate to succinate.
Kateryna Kukil, Jeffrey A. Hawkes, Cecilia Blikstad, Pia Lindberg   +3 more
wiley   +1 more source