Results 71 to 80 of about 5,201,388 (369)

Evaluation of genome sequencing quality in selected plant species using expressed sequence tags. [PDF]

PLoS ONE, 2013
BACKGROUND: With the completion of genome sequencing projects for more than 30 plant species, large volumes of genome sequences have been produced and stored in online databases.
Lingfei Shangguan, Jian Han, Emrul Kayesh, Xin Sun, Changqing Zhang, Tariq Pervaiz, Xicheng Wen, Jinggui Fang   +7 more
doaj   +1 more source

Genome sequence of Christensenella minuta DSM 22607T [PDF]

, 2017
Obesity influences and is influenced by the human gut microbiome. Here, we present the genome of Christensenella minuta, a highly heritable bacterial species which has been found to be strongly associated with obesity through an unknown biological ...
Hallsworth-Pepin, Kymberlie, Martin, John, Mitreva, Makedonka, Rosa, Bruce A, Wollam, Aye   +4 more
core   +2 more sources

Genome sequence of the progenitor of the wheat D genome Aegilops tauschii

Nature, 2017
Aegilops tauschii is the diploid progenitor of the D genome of hexaploid wheat (Triticum aestivum, genomes AABBDD) and an important genetic resource for wheat. The large size and highly repetitive nature of the Ae. tauschii genome has until now precluded
M. Luo, Y. Gu, D. Puiu, Hao Wang, S. Twardziok, K. Deal, N. Huo, Tingting Zhu, Le Wang, Yi Wang, P. McGuire, Shuyan Liu, H. Long, R. Ramasamy, Juan C. Rodriguez, S. L. Van, Luxia Yuan, Zhenzhong Wang, Zhiqiang Xia, Lichan Xiao, O. Anderson, S. Ouyang, Yong Liang, A. Zimin, G. Pertea, P. Qi, J. Bennetzen, Xiongtao Dai, Matthew Dawson, H. Müller, Karl G. Kugler, Lorena Rivarola-Duarte, M. Spannagl, K. Mayer, Fu-Hao Lu, M. Bevan, P. Leroy, Pingchuan Li, F. You, Qixin Sun, Zhiyong Liu, E. Lyons, T. Wicker, S. Salzberg, K. Devos, J. Dvorak   +45 more
semanticscholar   +1 more source

MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads

bioRxiv, 2023
Background  PacBio high fidelity (HiFi) sequencing reads are both long (15–20 kb) and highly accurate (> Q20). Because of these properties, they have revolutionised genome assembly leading to more accurate and contiguous genomes.
Marcela Uliano-Silva, João Gabriel R. N. Ferreira, Ksenia Krasheninnikova, G. Formenti, Linelle Abueg, J. Torrance, Eugene W. Myers, R. Durbin, Mark Blaxter, Shane A. McCarthy   +9 more
semanticscholar   +1 more source

Circulating histones as clinical biomarkers in critically ill conditions

FEBS Letters, EarlyView.
Circulating histones are emerging as promising biomarkers in critical illness due to their diagnostic, prognostic, and therapeutic potential. Detection methods such as ELISA and mass spectrometry provide reliable approaches for quantifying histone levels in plasma samples.
José Luis García‐Gimenez, Juan Carlos Ruiz‐Rodríguez, Ricard Ferrer, Raquel Durá, Antonio Artigas, Iván Bajaña, David Bolado López de Andujar, Irene Cánovas‐Cervera, Adrián Ceccato, Luis Chiscano‐Camón, Elena Climent‐Martinez, Georgia García Fernández, Gemma Goma, Verónica Monforte, Beatriz Quevedo‐Sánchez, Adolf Ruiz‐Sanmartín, Antonio Sierra‐Rivera, Nieves Carbonell Monleón   +17 more
wiley   +1 more source

Draft Genome Sequence of Fructophilic Lactobacillus florum. [PDF]

, 2013
Herein we report the first genome sequence for Lactobacillus florum. L. florum 2F was isolated from Valencia orange leaves and is fructophilic, like other strains of this species. The draft genome of L.
Kim, Eun Bae, Kopit, Lauren M, Marco, Maria L, Tyler, Charlotte A   +3 more
core   +2 more sources

Insights into pegRNA design from editing of the cardiomyopathy‐associated phospholamban R14del mutation

FEBS Letters, EarlyView.
This study reveals how prime editing guide RNA (pegRNA) secondary structure and reverse transcriptase template length affect prime editing efficiency in correcting the phospholamban R14del cardiomyopathy‐associated mutation. Insights support the design of structurally optimized enhanced pegRNAs for precise gene therapy.
Bing Yao, Qiangbing Yang, Christian J.B. Snijders Blok, Mark A. Daniels, Pieter A. Doevendans, Raymond Schiffelers, Joost P.G. Sluijter, Zhiyong Lei   +7 more
wiley   +1 more source

Genome sequence of Helicobacter heilmannii sensu stricto ASB1 isolated from the gastric mucosa of a kitten with severe gastritis [PDF]

, 2012
Here we report the genome sequence of Helicobacter heilmannii sensu stricto ASB1 isolated from the gastric mucosa of a kitten with severe gastritis.
Deforce, Dieter, Ducatelle, Richard, Flahou, Bram, Haesebrouck, Freddy, Ledesma, Jesica, Smet, Annemieke, Van Nieuwerburgh, Filip   +6 more
core   +2 more sources

NCBI prokaryotic genome annotation pipeline

Nucleic Acids Research, 2016
Recent technological advances have opened unprecedented opportunities for large-scale sequencing and analysis of populations of pathogenic species in disease outbreaks, as well as for large-scale diversity studies aimed at expanding our knowledge across ...
T. Tatusova, Michael DiCuccio, Azat Badretdin, V. Chetvernin, Eric P. Nawrocki, L. Zaslavsky, A. Lomsadze, K. Pruitt, M. Borodovsky, J. Ostell   +9 more
semanticscholar   +1 more source

Intron‐oriented HTLV‐1 integration in an adult T‐cell leukemia/lymphoma cell line sustains expression of intact ift81 mRNA

FEBS Letters, EarlyView.
In the adult T‐cell leukemia/lymphoma (ATL) cell line ED, the human T‐cell leukemia virus type 1 (HTLV‐1) provirus was integrated into the intron of the ift81 gene in the antisense orientation. Despite this integration, both the intact ift81 and the viral oncogene hbz were simultaneously expressed, likely due to the functional insufficiency of viral ...
Mayuko Yagi, Yuka Hirosawa, Yusaku Sagisaka, Minami Hama, Satoshi Takeda, Jun A. Komano   +5 more
wiley   +1 more source