Results 31 to 40 of about 2,337,583 (311)
The South Asian Genome [PDF]
, 2014 The genetic sequence variation of people from the Indian subcontinent who comprise one-quarter of the world's population, is not well described. We carried out whole genome sequencing of 168 South Asians, along with whole-exome sequencing of 147 South ...Li Yingrui, Afaq, S, Elliott Paul, Aitman, Timothy J., Scott, WR, Jun Wang (5906), Vandrovcova, Jana, Gaulton, KJ, McCarthy, Mark I, Gaulton Kyle J., Northwood Korrinne, Turro, Ernest, Frank Geoghegan, Sehmi Joban, Elliott, Paul, Frank Geoghegan (614027), Saima Afaq (614013), Afzal, Uzma, Scott, William R, Chambers John C., Northwood, K, Jun Wang, Jagvir Grewal, Grewal Jagvir, Kooner, Jaspal, Alexandra M Lewin, Afzal, U, Jaspal S. Kooner (163553), Butcher, S, Al-hussaini, Abtehale, Mills Rebecca, Wang, J, Afaq, Saima, Chambers, John, Lewin, Alexandra M, Chambers, John C, Vandrovcova Jana, Zhang, W, Korrinne Northwood (614026), Rebecca Mills (614022), Gaulton, Kyle J., Gurpreet S. Wander (163534), Laticia Oozageer (614019), James Abbott, Timothy J Aitman, Mark I. McCarthy (145748), Oozageer, L, Uzma Afzal, Sarah Butcher, Yingrui Li (149030), Joban Sehmi (245407), Kooner, IK, Mccarthy, Mark I., Sehmi, Joban, Al-Hussaini Abtehale, Weihua Zhang, Kooner Jaspal S., Loh, Marie, Lavery Anita, Saima Afaq, Jana Vandrovcova, William R Scott, Vasileios Panoulas, Grewal, Jagvir, Wass, MN, Alexandra M. Lewin (614025), Turro Ernest, Chambers, JC, Lavery, A, James Scott (40922), Uzma Afzal (614012), Turro, E, Lewin, AM, Grewal, J, McCarthy, MI, Weihua Zhang (44940), Ernest Turro (85076), McCarthy Mark I., Scott, James, Lehne, B, Sian-Tsung Tan, Jaspal S Kooner, Afaq Saima, Tan Sian-Tsung, Jana Vandrovcova (90909), Wang Jun, Laticia Oozageer, Pearson, Richard D, Richard D. Pearson (614015), Wander Gurpreet S., Gurpreet S Wander, Tan, ST, Abtehale Al-Hussaini (614021), Marie Loh, Ishminder K. Kooner (614020), Wang, Jun, Butcher, Sarah, Pearson, RD, Ishminder K Kooner, Abbott, J, Kyle J. Gaulton (277252), Kooner Ishminder K., Benjamin Lehne (215790), Li, Y, Aitman, TJ, Li, X, Anita Lavery, Lavery, Anita, Lewin Alexandra M., Abbott, James, William R. Scott (391938), Pearson Richard D., Vasileios Panoulas (614024), Kooner, Jaspal S, Jagvir Grewal (614023), Oozageer, Laticia, Lewin, Alexandra M., Miller Kathryn, Xinzhong Li, Aitman Timothy J., Sarah Butcher (204203), Northwood, Korrinne, Miller, Kathryn, Wass, Mark N, Lehne Benjamin, Scott, J, Abbott, James; id_orcid, Lehne, Benjamin, Kathryn Miller (614018), Sian-Tsung Tan (614011), Kooner, Ishminder K, James Abbott (614010), Panoulas Vasileios, Li Xinzhong, Richard D Pearson, Kyle J Gaulton, Elliott, P, Geoghegan Frank, Paul Elliott, Panoulas, Vasileios, Wander, Gurpreet S, Al-Hussaini, A, O'Reilly, P, Aitman, Timothy J, Li, Yingrui, James Scott, Kooner, Jaspal S., Abbott James, Wass Mark N., Kooner, JS, Vandrovcova, J, Marie Loh (6467), O'reilly, Paul, Oozageer Laticia, Chambers, John C., Ernest Turro, Panoulas, V, Wass, Mark N., Zhang Weihua, Yingrui Li, Scott, William R., Scott William R., Loh Marie, O'Reilly Paul, Korrinne Northwood, Rebecca Mills, John C Chambers, Tan, Sian-tsung, Zhang, Weihua, Paul O'Reilly (614014), Butcher Sarah, Sehmi, J, Paul O'Reilly, Mark N. Wass (614017), Li, Xinzhong, Mark I McCarthy, Mills, Rebecca, Tan, S-T, Paul Elliott (27295), Afzal Uzma, Benjamin Lehne, Wander, Gurpreet S., Abtehale Al-Hussaini, Mills, R, Zhi, Degui, Timothy J. Aitman (250706), Wander, GS, Pearson, Richard D., Loh, M, John C. Chambers (163544), Anita Lavery (614016), Scott James, Geoghegan, F, Mark N Wass, Gaulton, Kyle J, Miller, K, Xinzhong Li (430872), Kathryn Miller, Kooner, Ishminder K., Geoghegan, Frank, Joban Sehmi +200 morecore +1 more sourceMulti-Platform Next-Generation Sequencing of the Domestic Turkey (Meleagris gallopavo): Genome Assembly and Analysis [PDF]
, 2010 A synergistic combination of two next-generation sequencing platforms with a detailed comparative BAC physical contig map provided a cost-effective assembly of the genome sequence of the domestic turkey (Meleagris gallopavo).Kent M Reed, Zhang, Liqing, Zhang Hong-Bin, Kim, Heebal, Rami A Dalloul, Langenberger, D., Scheuring, C., Evans, Clive, Crooijmans, R. P. M. A., Lee, Mi-Kyung, Lee, Taeheon, Kim, H., Evans, C., Nefedov Mikhail, Mane, Shrinivasrao, Frederickson, K. M., Crooijmans, Richard P. M. A., Williams, K. P., Marz, M., Liqing Zhang, Paul Flicek, Dodgson, J. B., David Langenberger, Smith Jacqueline, Dodgson, J. B., Flicek, Paul, Dong, J. J., Jiang, A., Kim, K. W., Zhang Yang, Kim, H., Manja Marz, Long, J. A., Williams, Kelly P., Schatz Michael C., Julie A. Long, Raineri Emanuele, Folkerts, O., Otto Folkerts, Zhang, H.-B., McElroy, A. P., Zhang, L., Delany, Mary E., Long, Julie A., Kelly P. Williams, McElroy Audrey P., Paton, I. R., Beal Kathryn, de Jong, P., Vilella, A. J., Yorke, J. A., Vilella Albert J., Salzberg, Steven L., Harkins Tim T., Megens, H.-J., Kim Sungwon, Crasta Oswald, Burt, David W., Bouffard Pascal, Schroeder, S., Albert J. Vilella, Burt, D. W., Liliana Florea, Mane Shrinivasrao, Carl J. Schmidt, Modise, Thero, Harkins, T. T., Jacqueline Smith, Frederickson, Karin M., Kristal Cooper, Stadler Peter F., Martien A. M. Groenen, Steven L. Salzberg, van Tassell, C. P., Smith, E. J., Blomberg, L. A., Modise, T., Tafer, Hakim, Schmidt, C. J., William S Payne, Dong, Jennifer J., Florea Liliana, Vilella, A. J., Notredame, C., Lee, M. K., Smith, J., Kathryn Beal, Jiang, A., Bouffard, Pascal, Geo Pertea, Mi-Kyung Lee, Mane, S., Roberts, Richard J., Delany, M. E., Jerry B. Dodgson, Schmidt, Carl J., Pertea, Geo, Searle Stephen M. J., Williams, K. P., Frederickson Karin M., Beal, K., Tim T Harkins, Lee, T., Langenberger, David, Searle, S. M. J., Ruffier, M., Puiu, D., Dalloul, R. A., Van Tassell, C. P., Schatz, M. C., Julie A Long, Jennifer J Dong, Raineri, E., Modise Thero, Long Julie A., Reed, Kent M., De, Supriyo, Oswald Crasta, Zimin, Aleksey V., Folkerts, O., Zhang, Y., Schroeder Steven, Roger A Coulombe, Hoffmann Steve, Crasta, Oswald, McElroy, Audrey P., Tu, Zhijian Jake, Florea, L., Magali Ruffier, de, J. P., Curtis P. Van Tassell, Williams Kelly P., William S. Payne, Megens, H. J., Zhang, X., Bouffard, P., James A Yorke, Kaiser, Pete, Daniela Puiu, Stephen M. J. Searle, Modise, T., Notredame Cédric, Groenen, M. A. M., Hoffmann, Steve, Notredame, C��dric, Ruffier Magali, Taeheon Lee, Guillaume Marcais, Evans Clive, Le Ann Blomberg, Qioa, Dan, Herrero Javier, Zhang Liqing, Crooijmans, R. P., Kim, S., Evans, C., Prickett, Dennis, Groenen, M. A., Cooper, K., Tu, Z. J., Dalloul, R.A., De Supriyo, Kaiser, P., Schmidt, C. J., Van Tassell Curtis P., Tafer, H., Megens, Hendrik-Jan, Mane, Shrinivasrao P., Tafer, H., Marcais, G., Xiaojun Zhang, Crasta, O., Kyu-Won Kim, Dodgson Jerry B., Aleksey V. Zimin, Reed, K. M., Steve Hoffmann, Tu, Zhijian (Jake), Dalloul, Rami A., Ann Blomberg Le, Hoffmann, S., Zhang, Yang, David W Burt, Kent M. Reed, Pieter de Jong, Aslam, Luqman, Marz, M., Groenen, Martien A. M., Michael C Schatz, Zhijian Jake Tu, Burt David W., Pascal Bouffard, Pertea Geo, Richard P M A Crooijmans, Audrey P. McElroy, David W. Burt, Sonstegard, T. S., Marcais, G., Hakim Tafer, Smith, J., Zhang, H. B., Ruffier, Magali, Mikhail Nefedov, Albert J Vilella, Megens Hendrik-Jan, Clive Evans, Hendrik-Jan Megens, Kaiser Pete, Dennis Prickett, Puiu Daniela, Dan Qioa, Schroeder, S., Zhang, Hong-Bin, Zhang, Xiaojun, Audrey P McElroy, Zimin Aleksey V., Vilella, Albert J., Groenen, M. A. M., Martien A M Groenen, Coulombe, R. A., Supriyo De, Scheuring, C., Qioa, D., Van, T. C. P., Nefedov, M., Kim, K.-W., de Jong Pieter, McElroy, A. P., Folkerts, Otto, Yorke James A., Harkins, Tim T., Rami A. Dalloul, Zhijian (Jake) Tu, Lee Taeheon, Crooijmans, R.P.M.A., Searle, S. M., Megens, H. J., Edward J. Smith, Paton Ian R., Salzberg, S. L., Aleksey V Zimin, Cooper Kristal, Ian R. Paton, Emanuele Raineri, Langenberger David, Tu Zhijian (Jake), Long, J. A., Qioa, D., Coulombe, R. A., Pete Kaiser, Aslam Luqman, Mane, S., Delany, M. E., Schatz, M. C., Sonstegard Tad S., Marz, Manja, Payne, William S., Carl J Schmidt, Andrew Jiang, Tu, Z., James A. Yorke, Long, J.A., Kelly P Williams, Lee, T., Edward J Smith, Notredame, Cédric, Stadler, P. F., Aslam, L., Prickett Dennis, Zimin, A. V., Herrero, J., Searle, S. M. J., Burt, D. W., Luqman Aslam, Crasta, O., Langenberger, D., Kaiser, P., Stadler, P. F., Van Tassell, Curtis P., Schmidt Carl J., Sonstegard, Tad S., Marz Manja, Lee, M. K., Puiu, Daniela, Marcais Guillaume, Crooijmans Richard P. M. A., Blomberg, Le Ann, Groenen Martien A. M., de Jong, P., Ruffier, M., Tad S. Sonstegard, Dalloul, R. A., Jiang Andrew, Frederickson, K. M., Florea, Liliana, Aslam, M.L., Smith Edward J., de Jong, Pieter, Cédric Notredame, Kim, K. W., Searle, Stephen M. J., Smith, Jacqueline, Harkins, T. T., Smith, Edward J., Karin M Frederickson, Chantel Scheuring, Marcais, Guillaume, Dalloul Rami A., Curtis P Van Tassell, Kim, Kyu-Won, Kim, S., Mary E Delany, Hong-Bin Zhang, Michael C. Schatz, Scheuring, Chantel, Kim Kyu-Won, Jiang, Andrew, Payne, W. S., Folkerts Otto, Zhang, H. B., Zimin, A. V., Schroeder, Steven, Yorke, J. A., Megens, H.J.W.C., Heebal Kim, Payne, W. S., Ann Blomberg, Le, Beal, K., Smith, Jacqueline; id_orcid, Puiu, D., Reed, K. M., Crooijmans, R. P. M. A., Qioa Dan, Notredame, C., Pertea, G., Stephen M J Searle, Zhang Xiaojun, Prickett, D., Flicek, P., Salzberg, S. L., Karin M. Frederickson, Florea, L., Coulombe, Roger A., Smith, E. J., Delany Mary E., Scheuring Chantel, Sungwon Kim, Salzberg Steven L., Aslam, L., Jerry B Dodgson, Yang Zhang, Yorke, James A., Raineri, Emanuele, Paton, I. R., Bouffard, P., Tafer Hakim, Cooper, K., Dong, J. J., Nefedov, Mikhail, Kim Heebal, Cooper, Kristal, Roger A. Coulombe, Tim T. Harkins, Tad S Sonstegard, De, S., Nefedov, M., Herrero, Javier, Blomberg, L. A., Lee, M.-K., Mary E. Delany, Raineri, E., Zhang, L., Hoffmann, S., De, S., Peter F Stadler, Kim, Sungwon, Zhang, X., Thero Modise, Beal, Kathryn, Sonstegard, T. S., Richard P. M. A. Crooijmans, Prickett, D., Steven Schroeder, Payne William S., Jennifer J. Dong, Groenen, M., Ann Blomberg, L., Lee Mi-Kyung, Zhang, Y., Flicek, P., Zimin, A.V., Dong Jennifer J., Schatz, Michael C., Coulombe Roger A., Peter F. Stadler, Flicek Paul, Javier Herrero, Paton, Ian R., Herrero, J., Ian R Paton, Dodgson, Jerry B., Steven L Salzberg, Shrinivasrao Mane, Stadler, Peter F., Pertea, G., Reed Kent M. +405 morecore +1 more sourceGenome sequencing of chimpanzee malaria parasites reveals possible pathways of adaptation to human hosts. [PDF]
, 2014 Plasmodium falciparum causes most human malaria deaths, having prehistorically evolved from parasites of African Great Apes. Here we explore the genomic basis of P.Conway, David J, Conway, David J., Ollomo, Benjamin, Ollomo, B., Böhme, Ulrike, Berriman, Matthew, Thomas, A. W., Bohme, U., Rayner, Julian C., Otto, Thomas D, Rayner, Julian C, Otto, Thomas D., Spottiswoode, N., Newbold, C., Otto, T. D., Pain, A., Pain, Arnab, Thomas, Alan W., Rayner, J. C., Berriman, M., Sanders, M., Conway, D. J., Renaud, F., Sanders, Mandy, Quail, Michael, Renaud, François, Quail, M., Thomas, Alan W, Spottiswoode, Natasha, Newbold, Chris, Prugnolle, Franck +30 morecore +1 more sourceWhole-genome sequencing confirms that Burkholderia pseudomallei multilocus sequence types common to both Cambodia and Australia are due to homoplasy [PDF]
, 2014 Whole-genome sequencing of the four isolates used in this study was supported by Wellcome Trust grant 098051, awarded to the Wellcome Trust Sanger Institute.Theobald, V, Vandamme, P, Jacobs, J A, Vandamme, Peter, Currie, Bart J, Holden, Matthew T G, Jacobs, Jan, Jacobs, JA, Price, Erin P, Spratt, BG, Peacock, S J, Jacobs, Jan A, Parkhill, J, Holden, Matthew TG, Sarovich, DS, Sarovich, Derek S, Spratt, Brian G, Theobald, Vanessa, De Smet, B, Kham, Chun, Thong, P, Spratt, B G, Heng, Seiha, Holden, MT, Heng, S, Price, EP, Peacock, SJ, Currie, B J, Phe, Thong, Mayo, Mark, Holden, M T G, Parkhill, Julian, Mayo, M, Thong, Phe, Kham, C, De Smet, Birgit, Currie, BJ, Peacock, Sharon J, Sarovich, D S +38 morecore +1 more sourcePre-sequencing assessment of RNA-Seq library quality using real-time qPCR
BioTechniquesRNA sequencing (RNA-Seq) is an essential assay for studying transcriptome profiling. Ribosomal RNA (rRNA) comprises more than 80–90% of total cellular RNA; efficient removal is essential for accurately capturing transcriptomes, particularly to sequence ...Kavya Kottapalli, Hsu Chao, Qi Jiang, Jimmonique Donelson, Nathanael Emerick, Sravya V Bhamidipati, Zeineen Momin, Tittu Mathew, Ziad M. Khan, Viktoriya Korchina, Marie-Claude Gingras, Donna Muzny, Richard Gibbs, Harsha Doddapaneni +13 moredoaj +1 more sourceStructural variation in the chicken genome identified by paired-end next-generation DNA sequencing of reduced representation libraries [PDF]
, 2011 Background Variation within individual genomes ranges from single nucleotide polymorphisms (SNPs) to kilobase, and even megabase, sized structural variants (SVs), such as deletions, insertions, inversions, and more complex rearrangements.Kerstens Hindrik HD, Vereijken, A., Martien AM Groenen, Bert W Dibbits, Groenen, M.A.M., Dibbits, B.W., Kerstens, H.H.D., Dibbits Bert W, Okimoto Ron, Hindrik HD Kerstens, Richard PMA Crooijmans, Addie Vereijken, Vereijken Addie, Crooijmans, R.P.M.A., Okimoto, R., Groenen Martien AM, Crooijmans Richard PMA, Ron Okimoto +17 morecore +2 more sourcesGenomic sequencing in cancer [PDF]
Cancer Letters, 2013 Genomic sequencing has provided critical insights into the etiology of both simple and complex diseases. The enormous reductions in cost for whole genome sequencing have allowed this technology to gain increasing use. Whole genome analysis has impacted research of complex diseases including cancer by allowing the systematic analysis of entire genomes ...Musaffe, Tuna, Christopher I, Amosopenaire +2 more sourcesHybrid de novo genome assembly and centromere characterization of the gray mouse lemur (Microcebus murinus)
BMC Biology, 2017 Background The de novo assembly of repeat-rich mammalian genomes using only high-throughput short read sequencing data typically results in highly fragmented genome assemblies that limit downstream applications.Peter A. Larsen, R. Alan Harris, Yue Liu, Shwetha C. Murali, C. Ryan Campbell, Adam D. Brown, Beth A. Sullivan, Jennifer Shelton, Susan J. Brown, Muthuswamy Raveendran, Olga Dudchenko, Ido Machol, Neva C. Durand, Muhammad S. Shamim, Erez Lieberman Aiden, Donna M. Muzny, Richard A. Gibbs, Anne D. Yoder, Jeffrey Rogers, Kim C. Worley +19 moredoaj +1 more source
