Results 31 to 40 of about 2,587,498 (385)
SODA: a TypeScript/JavaScript Library for Visualizing Biological Sequence Annotation [PDF]
, 2022 We present SODA, a lightweight and open-source visualization library for biological sequence annotations that enables straightforward development of flexible, dynamic, and interactive web graphics. SODA is implemented in TypeScript and can be used as a library within TypeScript and JavaScript.
arxiv +1 more source
Biases in the SMART-DNA library preparation method associated with genomic poly dA/dT sequences. [PDF]
PLoS ONE, 2017 Avoiding biases in next generation sequencing (NGS) library preparation is crucial for obtaining reliable sequencing data. Recently, a new library preparation method has been introduced which has eliminated the need for the ligation step.
Oriya Vardi +4 more
doaj +1 more source
Optimization of high molecular weight DNA extraction methods in shrimp for a long-read sequencing platform [PDF]
PeerJ, 2020 Marine organisms are important to global food security as they are the largest source of animal proteins feeding mankind. Genomics-assisted aquaculture can increase yield while preserving the environment to ensure sufficient and sustainable production ...
Pacharaporn Angthong +11 more
doaj +2 more sources
PLoS ONE, 2013 A novel pyrethroid-degrading esterase gene pytY was isolated from the genomic library of Ochrobactrum anthropi YZ-1. It possesses an open reading frame (ORF) of 897 bp.
Zhiyong Ruan +6 more
semanticscholar +1 more source
GENOME: A GENeric methodology for Ontological Modelling of Epics [PDF]
, 2022 Ontological knowledge modelling of epics, though being an established research arena backed by concrete multilingual and multicultural works, still suffer from two key shortcomings. Firstly, all epic ontological models developed till date have been designed following ad-hoc methodologies, most often, combining existing general purpose ontology ...
arxiv +1 more source
Characterization of Mauritius parakeet (Psittacula eques) microsatellite loci and their cross-utility in other parrots (Psittacidae, Aves). [PDF]
, 2009 We characterized 21 polymorphic microsatellite loci in the endangered Mauritius parakeet (Psittacula eques). Loci were isolated from a Mauritius parakeet genomic library that had been enriched separately for eight different repeat motifs.
Dawson, Deborah A. +4 more
core +1 more source
Molecular Plant-Microbe Interactions, 2000 A resistance (R) gene-rich 2S chromosomal segment from Triticum ventricosum contains a cereal cyst nematode (CCN; Heterodera avenae) R gene locus CreX and a closely linked group of genes (Sr38, Yr17, and Lr37) that confer resistance to stem rust ...
S. Seah +4 more
doaj +1 more source
Exome sequencing from nanogram amounts of starting DNA: comparing three approaches. [PDF]
PLoS ONE, 2014 Hybridization-based target enrichment protocols require relatively large starting amounts of genomic DNA, which is not always available. Here, we tested three approaches to pre-capture library preparation starting from 10 ng of genomic DNA: (i and ii ...
Vera N Rykalina +5 more
doaj +1 more source
PLoS ONE, 2012 There is considerable interest in pneumococcal protein antigens capable of inducing serotype-independent immunoprotection and of improving, thereby, existing vaccines. We report here on the immunogenic properties of a novel surface antigen encoded by ORF
Angela Cardaci +15 more
semanticscholar +1 more source
Competitive Genomic Screens of Barcoded Yeast Libraries [PDF]
Journal of Visualized Experiments, 2011 By virtue of advances in next generation sequencing technologies, we have access to new genome sequences almost daily. The tempo of these advances is accelerating, promising greater depth and breadth. In light of these extraordinary advances, the need for fast, parallel methods to define gene function becomes ever more important.
Lawrence E. Heisler +7 more
openaire +3 more sources