Results 51 to 60 of about 596,095 (346)

Shigella Draft Genome Sequences: Resources for Food Safety and Public Health. [PDF]

open access: yes, 2017
Shigella is a major foodborne pathogen that infects humans and nonhuman primates and is the major cause of dysentery and reactive arthritis worldwide. This is the initial public release of 16 Shigella genome sequences from four species sequenced as part ...
Chen, Poyin   +5 more
core   +1 more source

Unlocking the potential of tumor‐derived DNA in urine for cancer detection: methodological challenges and opportunities

open access: yesMolecular Oncology, EarlyView.
Urine is a rich source of biomarkers for cancer detection. Tumor‐derived material is released into the bloodstream and transported to the urine. Urine can easily be collected from individuals, allowing non‐invasive cancer detection. This review discusses the rationale behind urine‐based cancer detection and its potential for cancer diagnostics ...
Birgit M. M. Wever   +1 more
wiley   +1 more source

Phage-DMS: A Comprehensive Method for Fine Mapping of Antibody Epitopes

open access: yesiScience, 2020
Summary: Understanding the antibody response is critical to developing vaccine and antibody-based therapies and has inspired the recent development of new methods to isolate antibodies.
Meghan E. Garrett   +5 more
doaj  

Epiviz Web Components: reusable and extensible component library to visualize functional genomic datasets [version 1; referees: 1 approved, 2 approved with reservations]

open access: yesF1000Research, 2018
Interactive and integrative data visualization tools and libraries are integral to exploration and analysis of genomic data. Web based genome browsers allow integrative data exploration of a large number of data sets for a specific region in the genome ...
Jayaram Kancherla   +3 more
doaj   +1 more source

Microsatellite primers for red drum (Sciaenops ocellatus) [PDF]

open access: yes, 2008
In this note, we document polymerase-chain-reaction (PCR) primer pairs for 101 nuclear-encoded microsatellites designed and developed from a genomic library for red drum (Sciaenops ocellatus).
Gold, John R.   +3 more
core  

Clinical applications of next‐generation sequencing‐based ctDNA analyses in breast cancer: defining treatment targets and dynamic changes during disease progression

open access: yesMolecular Oncology, EarlyView.
Circulating tumor DNA (ctDNA) offers a possibility for different applications in early and late stage breast cancer management. In early breast cancer tumor informed approaches are increasingly used for detecting molecular residual disease (MRD) and early recurrence. In advanced stage, ctDNA provides a possibility for monitoring disease progression and
Eva Valentina Klocker   +14 more
wiley   +1 more source

Phylogenetically diverse ureC genes and their expression suggest the urea utilization by bacterial symbionts in marine sponge Xestospongia testudinaria. [PDF]

open access: yesPLoS ONE, 2013
Urea is one of the dominant organic nitrogenous compounds in the oligotrophic oceans. Compared to the knowledge of nitrogen transformation of nitrogen fixation, ammonia oxidization, nitrate and nitrite reduction mediated by sponge-associated microbes ...
Jing Su   +5 more
doaj   +1 more source

Comparing DNA sequence collections by direct comparison of compressed text indexes [PDF]

open access: yesLecture Notes in Computer Science Volume 7534, 2012, pp 214-224, 2013
Popular sequence alignment tools such as BWA convert a reference genome to an indexing data structure based on the Burrows-Wheeler Transform (BWT), from which matches to individual query sequences can be rapidly determined. However the utility of also indexing the query sequences themselves remains relatively unexplored.
arxiv   +1 more source

Genetic characterization of citrus rootstocks by using STMS markers : [P24] [PDF]

open access: yes, 2008
STMS markers were used to characterize 41 Citrus rootstocks: A total of 10 Citrus-specific primers were tested, and 9 produced clear, reproducible and discrete bands.
Gonul, S.   +7 more
core  

AnnotationSketch: a genome annotation drawing library [PDF]

open access: yesBioinformatics, 2008
Abstract Summary: To analyse the vast amount of genome annotation data available today, a visual representation of genomic features in a given sequence range is required. We developed a C library which provides layout and drawing capabilities for annotation features.
Malte Mader   +4 more
openaire   +3 more sources

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