Results 71 to 80 of about 31,009 (260)
Calculation of Force Field Grids for Molecular Docking Using Graphics Processing Unit [PDF]
Журнал Сибирского федерального университета: Серия Биология, 2014 The vast majority of problems faced by bioinformatics are very complex and time consuming. They require the use of modern high-performance computational systems and the development of algorithms for such system.
Mikhail A. Farkov
doaj
MATria: a unified centrality algorithm
BMC Bioinformatics, 2019 Background Computing centrality is a foundational concept in social networking that involves finding the most “central” or important nodes. In some biological networks defining importance is difficult, which then creates challenges in finding an ...
Trevor Cickovski +2 more
doaj +1 more source
ADP‐ribosylation: An emerging regulator of the epigenome
Molecular Oncology, EarlyView.ADP‐ribosylation has emerged as a dynamic epigenetic signaling mechanism that modifies histones and chromatin‐associated proteins. Through coordinated PARylation and MARylation, it integrates with other histone modifications to regulate chromatin structure, transcription factor activity, and gene expression, influencing genome function and disease ...
Cristel V. Camacho +2 more
wiley +1 more source
FEBS Open Bio, EarlyView.This protocol paper outlines methods to establish the success of a time‐resolved serial crystallographic experiment, by means of statistical analysis of timepoint data in reciprocal space and models in real space. We show how to amplify the signal from excited states to visualise structural changes in successful experiments.
Jake Hill +4 more
wiley +1 more source
Implementation of a Fully-Parallel Turbo Decoder on a General-Purpose Graphics Processing Unit
IEEE Access, 2016 Turbo codes comprising a parallel concatenation of upper and lower convolutional codes are widely employed in the state-of-the-art wireless communication standards, since they facilitate transmission throughputs that closely approach the channel capacity.
An Li +3 more
doaj +1 more source
FEBS Open Bio, EarlyView.The dFoCC pipeline starts with observed DED and resting‐state coordinates, which are then used to generate a library of triggered states. Correlation analysis of the calculated DED features of each candidate vs observed DED permits quantitative evaluation of candidate structural quality.
Meng Iao Fong +3 more
wiley +1 more source
A yeast model of 5‐oxoproline accumulation reveals a general toleration to 5‐oxoproline
FEBS Open Bio, EarlyView.Using a yeast model, we show that even high accumulation of 5‐oxoproline causes only mild cellular stress and does not trigger oxidative stress. Instead, cells adapt by activating efflux pumps and diverse protective pathways, suggesting that previously proposed harmful effects of 5‐oxoproline may arise from indirect metabolic imbalances rather than the
Pratiksha Dubey +4 more
wiley +1 more source
Analysis of Fast Fourier Transformations algorithm for CUDA Architecture
Lietuvos Matematikos Rinkinys, 2012 In this work Fast Fourier transformation algorithm for general purpose graphics processing unit processing (GPGPU) is discussed. Algorithm structure and individual stages performance were analysed.
Beatričė Andziulienė +2 more
doaj +1 more source
FEBS Open Bio, EarlyView.Time‐restricted feeding (TRF) in mice increased liver fatty acid oxidation and decreased fatty acid biosynthesis. These alterations persisted when TRF was discontinued and the host was infected with Mycobacterium tuberculosis. Pre‐exposure to TRF did not alter tissue (lung and spleen) mycobacterial burden but significantly reduced CD3+ T cells in lungs
Ashish Gupta +7 more
wiley +1 more source
Graphics-processing-unit-accelerated Monte Carlo simulation of polarized light in complex three-dimensional media. [PDF]
J Biomed Opt, 2022 Yan S +3 more
europepmc +1 more source