Oceans hold a stunning number of unique microorganisms, which remain unstudied by culture-dependent methods due to failures in establishing the right conditions for these organisms to grow.
José Diogo Neves dos Santos +5 more
doaj +3 more sources
Application of iChip to Grow “Uncultivable” Microorganisms and its Impact on Antibiotic Discovery
Antibiotics have revolutionized modern medicine, allowing significant progress in healthcare and improvement in life expectancy. Development of antibiotic resistance by pathogenic bacteria is a natural phenomenon; however, the rate of antibiotic ...
Rinzhin T. Sherpa +2 more
doaj +4 more sources
The adaptation chip: repurposing the principles of the ichip for guiding in situ experimental evolution. [PDF]
Abstract Soil microbial ecosystems are complex and difficult to replicate in laboratory settings. It is often unclear which pressures most strongly shape microbial survival and evolution in situ, and new methods are needed to intersect the manipulative power of the lab with the reality of field environments.
Kaminsky LM +3 more
europepmc +2 more sources
Signal Amplification for Fluorescent Staining of Single Particles in Liquid Biopsies: Circulating Tumour Cells and Extracellular Vesicles. [PDF]
ABSTRACT Immunofluorescence (IF) staining represents a convenient and cost‐effective approach to analysing single extracellular vesicles (EVs) and identifying subpopulations with specific roles or biological functions. However, the application of the method is challenged by the weak and unstable signals generated by the low abundant markers carried by ...
Cavallaro S +13 more
europepmc +2 more sources
Diffusion microchamber array (DMA) devices have provided contemporary microbiologists with a successful alternative to the century-old plating method using petri dishes to isolate and cultivate environmental bacteria. The “ichip” DMA device, developed by
Michael J. Braus +3 more
doaj +1 more source
A critical role of the Thy28-MYH9 axis in B cell-specific expression of the Pax5 gene in chicken B cells. [PDF]
Accumulating evidence suggests that Pax5 plays essential roles in B cell lineage commitment. However, molecular mechanisms of B cell-specific expression of Pax5 are not fully understood.
Toshitsugu Fujita +2 more
doaj +1 more source
Direct identification of insulator components by insertional chromatin immunoprecipitation. [PDF]
Comprehensive understanding of mechanisms of epigenetic regulation requires identification of molecules bound to genomic regions of interest in vivo. However, non-biased methods to identify molecules bound to specific genomic loci in vivo are limited ...
Toshitsugu Fujita, Hodaka Fujii
doaj +1 more source
Use of Ichip for High-Throughput In Situ Cultivation of “Uncultivable” Microbial Species [PDF]
ABSTRACT One of the oldest unresolved microbiological phenomena is why only a small fraction of the diverse microbiological population grows on artificial media. The “uncultivable” microbial majority arguably represents our planet's largest unexplored pool of biological and chemical novelty. Previously we showed that species from
D, Nichols +8 more
openaire +2 more sources
Novel and Conventional Isolation Techniques to Obtain Planctomycetes from Marine Environments
Bacteria from the distinctive Planctomycetes phylum are well spread around the globe; they are capable of colonizing many habitats, including marine, freshwater, terrestrial, and even extreme habitats such as hydrothermal vents and hot springs.
Inês Vitorino +5 more
doaj +1 more source
Chromatin unwinding state for in situ identification and lineage tracing of circulating tumor cells. [PDF]
The detection of circulating tumor cells (CTCs) through liquid biopsy offers a non‐invasive approach for accurately monitoring cancer dissemination and evaluating therapeutic efficiency. However, their rarity and heterogeneity limit conventional tumor antigen labelling‐based methods in identifying and tracing CTCs.
Ye B +32 more
europepmc +2 more sources

