Results 111 to 120 of about 2,525,472 (291)

Tree Compatibility, Incomplete Directed Perfect Phylogeny, and Dynamic Graph Connectivity: An Experimental Study

open access: yesAlgorithms, 2019
We study two problems in computational phylogenetics. The first is tree compatibility. The input is a collection of phylogenetic trees over different partially-overlapping sets of species.
David Fernández-Baca, Lei Liu
doaj   +1 more source

Differential regulation of ZFAS1 splice variants by endoplasmic reticulum stress in hepatocyte cell lines

open access: yesFEBS Open Bio, EarlyView.
ZFAS1 is a lncRNA promoting cell proliferation and migration, exhibiting high expression in various cancers. It is conserved, widely expressed, and produces multiple splice variants with unclear roles. We identified several splice variants in hepatocyte models, and found that inhibiting or suppressing regulators of the unfolded protein response (PERK ...
Sébastien Soubeyrand   +2 more
wiley   +1 more source

Finding Informative Skyline Results Over Incomplete Data With Threshold-Based Bucket Skyline Algorithm

open access: yesIEEE Access
Skyline queries which return objects that are not dominated by any other objects, have been integrated into various real-world database applications. However, the presence of incomplete data in databases, may lead into cyclic dominance relation that none
Zhang Xiaowei   +4 more
doaj   +1 more source

Nuclear pore links Fob1‐dependent rDNA damage relocation to lifespan control

open access: yesFEBS Open Bio, EarlyView.
Damaged rDNA accumulates at a specific perinuclear interface that couples nucleolar escape with nuclear envelope association. Nuclear pores at this site help inhibit Fob1‐induced rDNA instability. This spatial organization of damage handling supports a functional link between nuclear architecture, rDNA stability, and replicative lifespan in yeast.
Yamato Okada   +5 more
wiley   +1 more source

C2α‐carbanion‐protonating glutamate discloses tradeoffs between substrate accommodation and reaction rate in actinobacterial 2‐hydroxyacyl‐CoA lyase

open access: yesFEBS Open Bio, EarlyView.
Enzymes of the 2‐hydroxyacyl‐CoA lyase group catalyze the condensation of formyl‐CoA with aldehydes or ketones. Thus, by structural adaptation of active sites, practically any pharmaceutically and industrially important 2‐hydroxyacid could be biotechnologically synthesized. Combining crystal structure analysis, active site mutations and kinetic assays,
Michael Zahn   +4 more
wiley   +1 more source

Learning with Missing or Incomplete Data [PDF]

open access: yes, 2009
The problem of learning with missing or incomplete data has received a lot of attention in the literature [6,10,13,21,23]. The reasons for missing data can be multi-fold ranging from sensor failures in engineering applications to deliberate withholding of some information in medical questioners in the case of missing input feature values or lack of ...
openaire   +1 more source

Data visualization for incomplete data

open access: yes, 2023
Missing data are ubiquitous in the social and human data sciences. Computational pipelines that accommodate incomplete data require exploration and evaluation of the missingness. The R package ggmice enables data analysts to visualize incomplete and imputed data.
openaire   +2 more sources

Analysing the significance of small conformational changes and low occupancy states in serial crystallographic data

open access: yesFEBS Open Bio, EarlyView.
This protocol paper outlines methods to establish the success of a time‐resolved serial crystallographic experiment, by means of statistical analysis of timepoint data in reciprocal space and models in real space. We show how to amplify the signal from excited states to visualise structural changes in successful experiments.
Jake Hill   +4 more
wiley   +1 more source

Screening and epitope characterization of Nidogen‐2‐specific nanobodies

open access: yesFEBS Open Bio, EarlyView.
Camel immunization and phage display were employed to generate high‐affinity VHH nanobodies against Nidogen‐2. After library construction, biopanning, ELISA screening, sequencing, and recombinant expression, selected nanobodies were purified and characterized, leading to the preliminary exploration of a nanobody‐based sandwich ELISA for specific ...
Jianchuan Wen   +9 more
wiley   +1 more source

The Dueling Hazards of Incomplete Revascularization and Incomplete Data [PDF]

open access: yesCirculation, 2006
Although the survival benefit of complete revascularization after bypass surgery is well documented, the importance of opening all stenotic or occluded vessels during percutaneous coronary intervention (PCI) is less certain. On the contrary, much data support targeting only the culprit vessel during PCI. A strategy of “ischemic-driven revascularization”
openaire   +1 more source

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