Phylogeny of Polemoniaceae Based on Nuclear Ribosomal Internal Transcribed Spacer DNA Sequences [PDF]
Nuclear ribosomal internal transcribed spacer (ITS) DNA sequences are used to estimate the phylogeny of 53 members of Polemoniaceae, representing all but two genera of the family. Fitch parsimony analysis of equal-weighted nucleotide sites result in 1080
Porter, J. Mark
core +1 more source
UCHIME improves sensitivity and speed of chimera detection [PDF]
Motivation: Chimeric DNA sequences often form during polymerase chain reaction amplification, especially when sequencing single regions (e.g. 16S rRNA or fungal Internal Transcribed Spacer) to assess diversity or compare populations.
Clemente, Jose C.+4 more
core +2 more sources
Internal transcribed spacer as the DNA barcode for pathogenic fungi
Identification of pathogenic fungi isolated from clinical specimens in clinical microbiology laboratories is primarily based on observing fungal phenotypic structures under the microscope and performing biochemical tests for fungal cultures. This conventional method is very time-consuming and labor-dependent.
openaire +3 more sources
Abstract Purpose This study quantitatively evaluates bladder changes and their dosimetric impact during the on‐couch adaptive process on a commercial CBCT‐based online adaptive radiotherapy (CT‐gART) platform. Methods Data from 183 fractions of ten patients receiving online ART for pelvic cancers were analyzed retrospectively.
Ingrid Valencia Lozano+7 more
wiley +1 more source
Sequence analysis of the second internal Transcribed spacer (ITS2) region of rDNA for species identification of trichostrongylus nematodes isolated from domestic livestock in Iran [PDF]
Background: Infectivity of herbivores with Trichostrongylus nematodes is widespread in many countries, having a major economic impact on breeding, survivability, and productivity of domestic livestock.
Fasihi Harandi, M.+5 more
core +2 more sources
Sampling Local Fungal Diversity in an Undergraduate Laboratory using DNA Barcoding [PDF]
Traditional methods for fungal species identification require diagnostic morphological characters and are often limited by the availability of fresh fruiting bodies and local identification resources.
Anderson, B. W.+18 more
core +3 more sources
Internal transcribed spacer sequence database of plant fungal pathogens: PFP-ITSS database
The nurseries and plantations of medicinally and economically important plants are facing challenge on health front as they are being rapidly exposed to fungal pathogens thereby affecting their health and productivity adversely.
Aman Chandra Kaushik+7 more
doaj
A procedure for unsupervised lexicon learning [PDF]
We describe an incremental unsupervised procedure to learn words from transcribed continuous speech. The algorithm is based on a conservative and traditional statistical model, and results of empirical tests show that it is competitive with other algorithms that have been proposed recently for this task.
arxiv
A method for measuring spatial resolution based on clinical chest CT sequence images
Abstract Purpose This study aimed to develop and validate a method for characterizing the spatial resolution of clinical chest computed tomography (CT) sequence images. Methods An algorithm for characterizing spatial resolution based on clinical chest CT sequence images was developed in Matlab (2021b).
Ying Liu+3 more
wiley +1 more source
ITS phylogeny of Balsamorhiza and Wyethia (Asteraceae: Heliantheae) [PDF]
Journal ArticleThe relationships among the species of Balsamorhiza and Wyethia (Asteraceae: Heliantheae) were examined using data from the internal transcribed spacer (ITS) region of the nuclear ribosomal DNA.
Bohs, Lynn A., Moore, Abigail J.
core