Species-specific identification of Pseudomonas based on 16S–23S rRNA gene internal transcribed spacer (ITS) and its combined application with next-generation sequencing [PDF]
BMC Microbiology, 2022 Background Pseudomonas species are widely distributed in the human body, animals, plants, soil, fresh water, seawater, etc. Pseudomonas aeruginosa is one of the main pathogens involved in nosocomial infections.
Shuqian Hu +6 more
doaj +2 more sources
Molecular phylogeny of Oncaeidae (Copepoda) using nuclear ribosomal internal transcribed spacer (ITS rDNA). [PDF]
PLoS ONE, 2017 Copepods belonging to the Oncaeidae family are commonly and abundantly found in marine zooplankton. In the Mediterranean Sea, forty-seven oncaeid species occur, of which eleven in the Gulf of Naples.
Iole Di Capua +5 more
doaj +2 more sources
Evaluating the ribosomal internal transcribed spacer (ITS) as a candidate dinoflagellate barcode marker. [PDF]
PLoS ONE, 2012 DNA barcoding offers an efficient way to determine species identification and to measure biodiversity. For dinoflagellates, an ancient alveolate group of about 2000 described extant species, DNA barcoding studies have revealed large amounts of ...
Rowena F Stern +12 more
doaj +2 more sources
New records of powdery mildew fungi on stone fruits from India [PDF]
Scientific ReportsPowdery mildew disease is one of the major fungal diseases, affecting most of the crops including stone fruits. Due to their economical significance, the precise identification proof of the causal fungus is fundamental for their effective control ...
Sana Surma +7 more
doaj +2 more sources
Banana Classification Using Sanger Sequencing of the Ribosomal DNA Internal Transcribed Spacer (ITS) Region [PDF]
PlantsBanana (Musa spp.) is one of the most economically important horticultural crops. There are many types of banana, with differing ploidy (usually diploid, triploid, or tetraploid) and genome types (most containing the A or/and B genome).
Hongyun Zeng +3 more
doaj +2 more sources
Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi. [PDF]
Proc Natl Acad Sci U S A, 2012 Six DNA regions were evaluated as potential DNA barcodes for Fungi, the second largest kingdom of eukaryotic life, by a multinational, multilaboratory consortium.
Schoch CL +8 more
europepmc +3 more sources
ANALISIS KEANEKARAGAMAN KULTIVAR PISANG MENGGUNAKAN PENANDA PCR-RFLP PADA INTERNAL TRANSCRIBED SPACER (ITS) DNA RIBOSOM [PDF]
Jurnal MIPA, 2012 Pisang merupakan bahan makanan pokok keempat terpenting di negara berkembang yang memiliki keanekaragaman sangat tinggi. Penanda DNA mikrosatelit dapat membedakan kultivar pisang yang memiliki genom A dengan kultivar pisang bergenom B.
T.W.D. Ekasari +2 more
doaj +1 more source
Isolation and Identification of fungi associated with diseased freshwater fishes in Terengganu, Malaysia [PDF]
Songklanakarin Journal of Science and Technology (SJST), 2021 Fish health problem presents an ongoing challenge for aquaculture as disease outbreaks cause fish mortalities and financial losses. This study investigated the fungal infections in common freshwater ornamental and food fish species in Terengganu ...
Khairulbariyyah Zakaria +16 more
doaj +1 more source
What Hides in the Heights? The Case of the Iberian Endemism Bromus picoeuropeanus
Plants, 2023 Bromus picoeuropeanus is a recently described species belonging to a complex genus of grasses. It inhabits stony soils at heights ranging from 1600 to 2200 m in Picos de Europa (Cantabrian Mountains, northern Spain).
Claudia González-Toral +3 more
doaj +1 more source
Identification and genetic diversity of Acer ibericum (Aceraceae) in South Caucasus
Journal of Forest Science, 2021 Internal transcribed spacer (ITS) sequence was tested in Acer ibericum for its suitability as a barcoding as well as population genetic marker. The marker was reliably used to identify A.
Juraj Paule +6 more
doaj +1 more source